KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368347
Entry
139368347         CDS       T10872                                 
Name
(RefSeq) lissencephaly-1 homolog B-like
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00565  Ether lipid metabolism
ocla01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    139368347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocla03036]
    139368347
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139368347
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    139368347
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139368347
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_SPT8 LisH WD40_RFWD3 LisH_PAC1 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH DUF7800
Other DBs
NCBI-GeneID: 139368347
NCBI-ProteinID: XP_070963216
LinkDB
Position
2:44544311..44573480
AA seq 410 aa
MVLSQRQRDELNRAIGDYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagagacaacgagatgaactaaaccgagcgataggagactacctccgc
tcaaacggctatgaagaagcctattccaccttcaagaaagaggcggagttagatatgaat
gaggagctagataagaagtacgctggtcttttggagaagaaatggacctctgtcatcaga
ttacagaagaaggtgatggagctggagtctaagctgaacgaggccaaggaggagatgact
ctagggggtcctgtggcccagaagagggatcctaaggagtggatcccccgtcccccagag
agatacgccctaagcggccaccgctcccccgtcacacgggtcatcttccacccggtcttc
tctgtcatggtcactgcttctgaggacgccaccatcaaggtgtgggactatgaggcaggg
gactttgagcggacactgaagggtcatacagactctgtccaggacatctcctttgaccag
acgggcaagctgctggcctcctgctctgcagacatgaccatcaagctgtgggacttccag
ggctttgagtgcatccgcaccatgcacggtcatgaccacaacgtgtcttctgtagccatc
atgcccaatggagaccacatagtctccgcctccagagacaagaccatcaagatgtgggag
gtggccactgggtattgtgtgaagacattcacaggccacagagaatgggtgaggatggtc
cggcccaaccaggatggttctcttatcgccagctgttccaacgaccagacggtgcgtgtg
tgggtggccacctccaaggagtgtaaggctgagctgcgggagcacgaacacgtggtggag
tgtattgcctgggcccccgataccgctcaccccactatcctggaggctactggctcagag
agtaagaagagtgggaagcccggcccattccttctctctggctctagagataagaccatc
aagatgtgggacatcagcactggcatgtgccttatgactctggtgggtcatgataactgg
gtgcgtggtgtgttggtgcaccctggaggcaggttcatagtgagctgtgctgatgataag
actctgaggatctgggactacaagaacaagcgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatatgcaccggactgctccctacgtggtgacaggcagcgtt
gatcagacagtcaaagtgtgggagtgtcgctga

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