Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368361
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Entry
139368361 CDS
T10872
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139368361
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
139368361
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Paralog
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
LRR_EndoS
LRR_Zer-1
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
139368361
NCBI-ProteinID:
XP_070963242
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Position
2:complement(44994121..45253113)
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AA seq
615 aa
AA seq
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MGAREASGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVICHRKKLMSVPE
GIPTETRLLDLSKNRIKTINMDEFATYPNLEELELNENTISAIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSMEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLIFLRLRHLNIYVIKDYSFKRLYRLKVLEIA
NWPYLDTMTSNCLYGLNLTSLTITNGNLTSIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKIFNVSGNALSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKAQQKFVDEGTTVHFVCQADGDPAPVIMWLSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHVHSYSPDWPHQPNKTFAFISNQPNENGGNGTRTN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGATKHNIEIEYVPRKSDAGMS
SSNADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagggaagcgagtgggcacagctacctggtggcttgctggcagcccattctg
attctgatgctgggcaccgtactgtccggttccaccacaggttgcccgtcccgctgcgag
tgcaatgcccaggagcgctcagtcatatgccaccgcaagaagcttatgtccgtccctgag
ggcatccccacagaaacgcggttgctggacctcagcaagaaccgcatcaagaccatcaac
atggatgagttcgcaacctaccccaacctggaggagctggagctcaacgaaaacaccatc
tccgctattgagcccggcgccttcaacaacctgtacggcctccggacattggggctgcgc
agcaacaagctcaaactcatccagctgggtgtgttcacgggcctcagcaacctcacccag
ttggacatcagtgagaacaagatagtcatcctgctggactatatgttccaagacctgtac
aacttgcgctccatggaggtgggcgacaatgacttggtgttcatctcccatcgggccttc
catggtctcagcagcctggagcagctgactttggagaagtgcaacctgacctcggtgccc
accgaggccttcacccaccttcacagtttgatctttctcaggctgcgccacctcaacatc
tatgttattaaggattactccttcaaaagactgtaccggctgaaagtgctggagatcgcc
aactggccctacctggacaccatgacctccaattgcctctatggactgaacctcacctcg
ctgaccatcaccaatggcaacctgacctccatcccatacgtggctctccggcacttggtc
tacctacggtttctgaatctgtcctataaccccatccacaccattgaggggaataagctc
catgaccttctgaggctccaggagtttcacctggttgggggcaggctggctatgatcgag
ccctactcgttccggggcctaaactatctgaagatcttcaatgtgtctggcaatgccttg
agcaccttggaggagtctgcgttccactcagtaggcaacctggagactctggcgctttac
gataaccccttggcatgtgactgccggctgctgtgggtgttccggagacgctggaggctc
aacttcaaccggcagcaacccacctgcgcttcacctgagttcgtacagggaaaagagttt
aaagatttcccggacgtcctgcagcccaactacttcacgtgtcgcaagtccaggatccgg
gaccgcaaggcgcagcagaaatttgtggacgagggaactactgttcattttgtatgccag
gcggacggtgatcccgccccagtcatcatgtggctctcaccccagaagcagttcatcacg
accaaaaccatcggacggctcacagtattcccagatggcacccttgaggtgcgctacgcg
cagattcaggataatggaacgtatgtgtgtatagccagcaacgccggtggcaatgacaca
tctctcgcccacctgcacgtccatagctactctccagactggcctcaccaacccaacaag
acctttgcattcatctccaaccagcccaatgagaatggtggcaatgggacgcgaaccaac
gtcccgttccccttcgacatcaagaccttaatcatcgccaccactatgggtttcatatct
ttccttggtgtcgtcctgttttgtctggtgctactctttctgtggagtagaggtaaaggg
gccacaaagcacaacatagagattgagtatgtgccacgcaagtcagacgctgggatgagc
agcagcaacgcagacgcccctcgcaagtttaacatgaaaatgatttaa
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