Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368401
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Entry
139368401 CDS
T10872
Name
(RefSeq) neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
L1 family
139368401
CD molecules [BR:
ocla04090
]
Proteins
139368401
Lectins [BR:
ocla04091
]
I-type lectins (Siglecs)
139368401
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139368401
NCBI-ProteinID:
XP_070963340
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Position
16:38434626..38515237
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AA seq
1280 aa
AA seq
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MPRTQRQQVGSRGRRTPLPLLLLPLFSLLLSHTPQLSQAAIHIPPNFKKPPVITTQPESI
TVFGAEDILLTCEASGNPPPEFRWKKDGVEFIPANYPGLSMSLGSGTFMTTGAGSGPMSQ
YQGKYSCYADNELGTAVSKEVQLITEHTPALQKEKKVKKKVEEGESVILKCNPPFSTVPP
VIHWMDKRLRHIELNDRVTQGRDGNLYFSHVTADDNRNDYTCNAQYLSARTILSKEPISL
TVTISNSVVRNRRPQMMRPSGAHSTYHTLRGQSLELECIVQGLPTPTVQWVRRDGQLSES
RTLRDLSDRLLRFSNISESDGGEYQCSANNSQGTVTHVYTVSVEAAPYWTKEPVSQLYAP
GETVRLDCQADGIPSPAVAWSMNGNPITGIDLDPRRIVRDGALILRDVVFTDTAVYQCQA
HNKHGTILVNTYIFVIELPPQILSADGQTYTVTEGQKAGLHCQTFGSPRPKVTWEVDNGA
SLLADPRVNLLTNGSLQITNISHDDEGLYTCSISNTNMSINAELEVLNRTVILSPPGDLR
VRPGKTVIFTCLAQVDSKLTPPHIQWRRSGQKLMQSYAEDKYTFEGPDLIVANVQTEDEG
VYTCEVITNLDMAEASGSITLVDRPDPPTQLQVSDPKHRGVTLSWTAGDDHNSPVIEFRV
EFKDHVSNEWGWEELKRVSGTEKSVNLALQPYVSYRFRVISVNDIGKSDPSTPSDLHSTP
PQAPDNNPEDVRSESTDPDTLVITWEEMDRRVFNGPEFQYKVFWRRVVGDGPTWHSNVTT
EPPYIVTEVGNFSAFEIKVQAVNQKGEGPEPDPVIGYSGENVPLEAPMDVGVVLLNSTAI
RVTWAAVDRDTVRGHLLGYKIHLTRFGSRGHHRGRRAREPESSMVVETGANEEKRVLGGL
RPYSHYALTVTVFNSKGEGPPSDPPLSFSTDEGAPGPPMSLHLESPAETEMTLHWTPPAQ
PNGVLKGYLLQYQQIVESDDSPVQVETIDDHTLTKLTLKQLDPKSRYRFYLRGRTSAGEG
EPITREGATTLDGAPPSNISLSVGEKCVNLSWVPGQRHRSVGFQVQYLNKNNGGKWKQSE
KLNSSQSFYQLKGLTPGSQYRLRFTFSNNTFWETEIRTEGAGVVDVQTGFATQGWFIGLV
SAIVLLLLVLLILCFIKRSKGGKYSVKDKEEGQVDSEARPMKDETFGEYSDNEEKRTASQ
PSLCDESKLCTSEDNLDGYNNGSSAVTEVNMEDSLVSQYSRPSEATPDPGTLQDSSPLNP
TATTPTPTNNGLPNSAAILD
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcacgcagcgacagcaggttggcagtagggggcgacgcacccctctccccctc
ctccttctccctctcttctccctcctcctatcccacactcctcagctcagccaagcagct
atacacatacctcccaacttcaaaaagcccccagtgatcaccacccagcctgagtccatc
accgtgttcggtgctgaagacatcctcctgacctgcgaagcatcaggaaaccctcctccg
gagtttcgttggaaaaaggatggggtggaatttatcccagccaattacccgggcctgtcg
atgtctctgggttccggaaccttcatgacaacaggggcagggtcaggacccatgagccaa
taccagggcaaatacagctgctacgctgataacgagctgggcaccgctgtctctaaagag
gtccagctcatcactgagcacaccccggcactccagaaagagaagaaggtgaaaaagaag
gtggaagaaggagagagtgtgatactgaaatgtaaccctcctttcagcactgttcctcct
gtcatccactggatggacaagagactccgtcacattgagctgaatgatcgcgtgacccaa
ggccgggacgggaacctctacttctctcacgttacagccgacgacaaccgcaacgactac
acctgtaatgcccagtaccttagtgctcgcaccatcctctccaaggaacccatcagcctc
accgtaaccatctctaactcagtggtgcggaaccgaagaccccagatgatgaggccctca
ggggcccacagcacttaccacaccctccggggccagagcctggagctggagtgcattgtc
cagggcctccctacccctacagtccagtgggtgaggagggacggtcagctgtccgagtct
cgtacactcagagatctgtctgaccgcctgctgcgcttcagtaacatctcagagagcgac
gggggagaataccagtgttcagccaacaactcacagggcacggtcacacacgtctacacc
gtcagcgtcgaagctgctccgtactggaccaaggagcccgtgagccagctttatgcccca
ggagagacagtgagactggactgtcaggccgatggcattccctcgcctgctgtcgcctgg
agcatgaatggaaatcccatcacaggtatagaccttgaccccaggcgtattgtgagagat
ggagctctgattctgagagatgtggtcttcactgatacagcagtctaccagtgtcaggcc
cacaacaaacacggaaccatcctagtcaatacctacatctttgtcatcgagctgccgcct
cagatcctgagtgcggacggacagacatacactgtcacagagggacagaaggctggtcta
cactgtcagacctttgggtctcccagacctaaagttacatgggaggtggacaatggcgcg
tctcttctggctgaccccagggttaacctgctgaccaatggaagcctccagatcaccaac
atctcccatgacgatgagggcctgtacacctgctccatcagcaacaccaacatgtcaatc
aacgctgagctggaggtgctgaacaggacagtgatcctgtctcctcccggggacctgcgt
gttaggcctgggaagacggtcatatttacctgcctggctcaggtggactccaaactgacc
cccccacacatccaatggaggaggagtggacagaaactaatgcagtcgtacgctgaggac
aagtacacgtttgagggccccgacctgatcgtggccaacgtgcagaccgaggacgagggg
gtttacacctgtgaggtcatcactaacctggatatggctgaggccagcggatccatcacg
ctagtcgaccgtccagatcctcccacccagctccaggtctctgaccctaaacaccgtgga
gtgactctcagctggaccgctggagatgaccacaacagccctgtcatagagtttcgggtg
gagtttaaggatcatgtttctaacgagtggggttgggaggagctgaaacgtgttagtgga
accgaaaagagtgtgaaccttgccctgcagccctatgtgtcctaccgtttccgggtcatc
tccgtcaacgacatcggcaagagtgatcccagcacgccttctgaccttcacagcacgcca
cctcaagctccagacaacaaccctgaggatgtgaggagtgagtctacagacccagacacc
ctggtcatcacatgggaggaaatggacaggcgtgtgttcaacggaccggagttccagtac
aaggtgttctggaggagggtagtaggtgacggccccacctggcactctaatgtcaccact
gagccaccgtacattgttactgaagtgggcaacttctcagccttcgagatcaaagtacag
gctgtcaatcagaaaggggagggacctgagccagaccctgtcattggctactccggagag
aatgtccccctggaggctcctatggatgtgggtgttgtgctgctcaacagtacagccatc
agggtaacatgggcagcagtggacagagatactgtcagaggacacctactgggatacaag
atccacctgacaaggttcggctccaggggccaccaccggggtcggagggccagagagccg
gagagcagcatggtggtggagacaggggccaatgaggagaagagggtcctggggggcctt
agaccctactcccactacgccctcacagtcactgtgttcaacagcaagggagaggggccc
ccctccgacccccccctgtccttcagtactgacgagggagctcctggcccccccatgtct
ctccacctagaaagccctgcagagacagagatgacccttcactggaccccccctgctcag
cccaacggggttctcaaaggatacctgctgcagtatcaacagatcgtggagagtgatgac
agcccggtgcaggtggagaccatagacgaccacacgctgaccaaactgaccctgaagcag
ctggaccccaagagccgttaccgcttctacctgagggggcgcacctcggccggagaagga
gagcccattacaagggagggcgccaccacgctggacggagctcctccgtccaacatcagc
ttgtctgtaggtgagaagtgtgttaacctgagctgggtgccaggccagagacacaggagt
gtgggcttccaggtccagtacctcaacaagaacaacggtggaaagtggaagcagtctgag
aagctgaactcgtcccagtcattctaccagctgaagggtctaaccccaggatcacagtac
cggctcagatttaccttcagcaacaacaccttctgggagacggagatcaggacagaggga
gcaggagtggtggatgtgcagacaggctttgctactcagggctggttcattgggctcgtt
agtgctatcgtgctgttgctgctggtactgctcatcctctgcttcatcaagaggagcaag
gggggaaagtattcagtcaaagataaggaggagggtcaggtagactctgaggcgcgccct
atgaaggatgaaacgttcggagagtacagcgataacgaggagaagcggacagccagccag
ccgtctctgtgtgacgagagcaagctgtgtaccagtgaggacaacctggatggctacaac
aacggcagcagtgctgtcaccgaggtgaacatggaggattccctggtcagccagtacagc
cggcccagcgaagccaccccggacccgggtacactgcaggacagctcccccctcaacccc
accgccaccaccccaacacccaccaacaacggcctgcctaactcggcggccatcttagat
tag
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