Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368430
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Entry
139368430 CDS
T10872
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139368430
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139368430
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139368430
Nuclear receptors [BR:
ocla03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
139368430
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139368430
NCBI-ProteinID:
XP_070963412
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Position
16:39816565..39894205
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AA seq
515 aa
AA seq
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MATNRERQVGQVGHMTGFPPAVYPFAFNSMRNHSSFDLLANSSLFGRFSTDLPKEMAALS
VETQSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNM
VYTCHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEELVPPESYE
LSGELEELVNKVSKAHQDTFPSLLQLGKYHTNSSAEQRVQLDLGLWDKFSELSTKCIIKI
VEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHN
AGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAISLISGDRMDLEEPQKVDKLQEPLLEAL
KIYARRRRPNKPHMFPRMLMKITDLRGISTKGAERALTLKMEIPGPMPPLIREMLENPEA
FEDQTESSGESSPPPAPPPAPPASTKPPATMKTEAEDEEDSWGTENGSEPSPEEEDEDDY
DDGEEEDRGSDSEGESWALESGSEGDRKSRARRAQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggaacggcaggtgggtcaggtgggtcacatgacagggttcccacct
gctgtctacccatttgccttcaactccatgcggaaccactcctcctttgacctgctggcc
aatagcagcctgtttgggagattcagcaccgacctccctaaagagatggctgcactgtcg
gtggagacccagagcaccagctcagaggagatggtccccagctctccctctccacctccc
ccgccacgcatctacaagccctgcttcgtgtgccaggacaagtcctccggctatcactac
ggggtcagctcctgtgagggctgcaagggcttcttccggcgcagtatccagaagaacatg
gtgtacacctgtcaccgggacaagaactgccagatcaacaaggtcaccaggaaccgctgc
cagtactgccgactgcagaagtgcttcgaggtcggcatgtccaaggaagcagtgcgcaac
gacaggaacaagaagaagaaggacgtgaaggaggagttggtgcctccggagagttatgag
ctgagtggagaactggaggagctggtcaacaaagttagcaaggcccaccaagacaccttc
ccctcactgctgcagctgggcaaataccacaccaactccagtgcagagcagcgcgtgcaa
ctggacctggggctgtgggataagttcagtgagctctccaccaagtgcatcatcaagatc
gtggagtttgccaagcgcctccccggcttcaccaccctcaccatcgctgaccagatcacc
ctcctcaagtcagcctgcctggacatcctgatgttgaggatctgcacgcgctacacccca
gagcaggacaccatgactttctctgacgggctgaccctgaaccggacccagatgcacaac
gcaggcttcggcccgctcacagacctggtgtttgccttcgctggccagctgctgcctctg
gagatggacgacacagagactggcctcctcagcgccatctccctcatttctggagaccgt
atggacctggaggagccccagaaggtggacaagctgcaggagcccctgctggaggccctg
aagatctacgcccgtcgcagacgccccaacaaaccacacatgttcccccgcatgctgatg
aagatcactgacctcagaggcatcagcaccaagggggccgagagggccctcactctgaag
atggagatcccaggccccatgcctcctctgatcagggagatgttagagaacccagaggcc
ttcgaggaccagacagagagcagtggagagagctccccaccgcctgcccctccacccgct
ccaccagcctccaccaagccccccgccaccatgaagactgaggccgaggacgaggaggac
agctgggggacagagaacggcagtgagccctccccagaggaggaagatgaggatgattat
gatgatggggaagaagaggacaggggctcggacagtgagggggaatcctgggctctggag
agtggcagcgaaggggataggaagagccgtgccaggagggcgcagtga
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