Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368438
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Entry
139368438 CDS
T10872
Name
(RefSeq) homeobox protein Hox-C5a-like
KO
K09305
homeobox protein HoxA/B/C5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139368438
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
139368438
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
139368438
NCBI-ProteinID:
XP_070963430
LinkDB
All DBs
Position
16:40048431..40051372
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AA seq
237 aa
AA seq
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MSSYVANSIFKQQTHEASSCSAMNSLGSYGSLSDFDQANYAYNGGLRDFNGTFTSSDATV
NSLKREEMNSSLRGKTDTQSPTRPQSYSALSSRNSVQNCLSDGILSKGNEMQMEVVENPR
TTTEESAIKVETMQPVKHQIHSKKHQDNQQQPQIFPWMTKLHMIHESSDGKRSRTSYTRY
QTLELEKEFHFNRYLARRRRIEIANTLCLNERQIKIWFQNRRMKWKKDSKLKSKDSI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctatgtagcaaattcaatttttaagcagcaaacgcacgaggcatcctcctgt
agcgccatgaatagtttaggcagttatggctctctctctgacttcgatcaagctaattat
gcctataacggaggtcttcgtgatttcaacggaacattcacctcctctgatgccactgta
aactctctaaaacgagaagagatgaactctagcctgcgaggcaaaacggacactcaatct
ccaacacgaccacagtcatactcagccttgagctcccggaactccgtgcagaactgcctc
agtgacggtatactgagcaaagggaatgaaatgcaaatggaggtggtcgaaaaccctaga
actacgaccgaagaaagcgcgatcaaagtcgaaactatgcaacctgtaaaacatcaaatc
cattcgaagaagcaccaagacaatcaacagcaaccgcagatttttccctggatgacaaaa
ctacacatgatccacgaatcatctgacggtaaacgctctcgaaccagttacacccgctac
cagactctggagttggagaaagagttccatttcaaccgttacctcgcccgtcgcaggcgt
attgagatcgccaataccctctgtctgaacgagaggcaaattaaaatttggttccagaat
cgacgtatgaagtggaagaaggattcgaaactgaaatcaaaggattcaatataa
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