Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368460
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Entry
139368460 CDS
T10872
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139368460
09143 Cell growth and death
04210 Apoptosis
139368460
09144 Cellular community - eukaryotes
04530 Tight junction
139368460
04540 Gap junction
139368460
09142 Cell motility
04814 Motor proteins
139368460
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139368460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139368460
03036 Chromosome and associated proteins [BR:
ocla03036
]
139368460
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139368460
04147 Exosome [BR:
ocla04147
]
139368460
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139368460
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139368460
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139368460
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139368460
Exosomal proteins of other body fluids (saliva and urine)
139368460
Exosomal proteins of colorectal cancer cells
139368460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139368460
NCBI-ProteinID:
XP_070963477
LinkDB
All DBs
Position
16:complement(40609861..40612983)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgtccatgtgggtcaggctggagtccagattggcaatgcctgc
tgggagctctactgcctggaacatgggatccagcctgacggacagatgcccagtgacaag
accatcggaggaggagacgactccttcaacaccttctttagtgagactggggctggaaag
catgtccccagggctgtgtttgtagacctggagcccacagtcatagatgaggtgcgcact
gggacctaccggcagttattccatcctgaacagctcatcaccggcaaagaggatgctgcc
aacaactacgcccgtggacactacactattggcaaagagatcattgacctggtgttggac
aggatccgcaaactggctgaccagtgcacaggccttcagggcttcctggttttccacagc
tttggaggtggcaccggctctggtttcacctctctgctgatggagcgcctgtctgttgac
tacggcaagaagtccaagctggagttctccatctatccagctccccaggtgtccacagct
gtggtggaaccttacaactccatcctgaccacccacaccaccctagagcactctgactgt
gctttcatggtggataatgaggctatatatgacatctgtcgtaggaacctcgacattgat
cgtcccacctacaccaacctcaacaggctcattagccagattgtttcttccattactgct
tcccttcgattcgatggtgcccttaatgttgatctgacagagttccagaccaacttggtg
ccctatccacgtattcattttcctctggccacctatgccccagtcatctctgcagagaag
gcttaccatgagcagctctctgtctctgagatcaccaatgcctgctttgagccggccaat
cagatggtgaaatgtgaccctcgccacggcaagtatatggcttgttgccttctgttccgt
ggtgatgtggtgcccaaagatgtcaatgctgctattgccaccatcaagaccaaacgttct
attcagtttgttgactggtgcccaactggcttcaaggttggcatcaactaccagcctccc
actgtagtcccaggtggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accactgctgtggcagaggcctgggctcgtcttgaccacaagtttgacctgatgtacgct
aaacgtgcctttgtgcactggtatgtgggtgagggcatggaggagggagagttctctgaa
gccagagaggacatggcagccctggagaaggattacgaggaggtaggggtcgactccatt
gagggggagggagaggaggagggagaggagtattga
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