Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368495
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Entry
139368495 CDS
T10872
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139368495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139368495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139368495
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139368495
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
139368495
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139368495
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_11
BAR
Trypan_PARP
PH_21
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
139368495
NCBI-ProteinID:
XP_070963564
LinkDB
All DBs
Position
16:complement(42080542..42153877)
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AA seq
848 aa
AA seq
DB search
MTVDFEECVKDSPRFRANINEVETEVVEIEVKLDKLVKLCSGMIEAGKAYVSANKLFVNG
IRDLSQQCKKDEMISECLEKCGESLQEIVNYHMILFDQAQRSVKQQLHTFVKEDVRKFKE
TKKHFDRVREDLEIAQVKNAQAPRSKPHEVEEATGTLSITRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMHAQYSLFQQGYNLLDEIDPYMKKLAAELDQLVIDSAMEKRDMEHKH
ATVQQRTLMQDFSYDDSKVELFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLV
YQKKLKDSLTVVVEDLRLCSVKPCEDIERRFCFEVVSPTKSCMLQAESDKLRLAWIQAVQ
ASIASAYRESPDYHYVERLDRTASPSVSSIDSASEPRERSMRGESILHRIQCLPGNEYCC
DCGQADPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSVI
NHIYEGACEEQGLKKPGPSSSRQEKEAWIKSKYVEKKFLKKLGATEVLVNGGRKSARRWS
VKKCRRHNSATTVPKTRRKYRQELGSASPATLSSAASALERKFRRESLFCPDELDNLFSY
FDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEEREVSEDSSGEAEMEPEP
ETQSDPEDRRELHPGALLYKASQARNLPVMAEALAHGAEVNSVNDEDDGKSPLIQAVIGG
SLIACEFLLQNAADVNQRDAKGRGPLHHATYLGHTGQVCLFLKRGATQNDGDEDGQDPLS
IAVQAANADIVTLLRLARMNEEMRESEGPFGQPGDTTYLDIFREFSHMASHNPEKLKRRS
VHFRHSFR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaagaatgtgtgaaagattcaccccggttcagggcgaacattaat
gaagtggagacggaggtggtggagattgaagtgaaactagacaagttggtgaagctatgc
agtgggatgatcgaggcagggaaggcgtatgtcagcgccaacaaactctttgtgaacggg
atccgggacctgtcccaacaatgcaagaaggatgagatgatatcggagtgtctggagaag
tgtggggagagcctccaggaaatagtcaactaccacatgattctgttcgatcaagcccag
agatctgtgaagcagcagttacacacctttgtgaaagaggatgtccgtaaattcaaggag
accaagaagcactttgaccgtgtgcgtgaggacttggagatagcccaggtgaagaacgcc
caggcccccaggagcaaacctcacgaggtggaggaggccaccggaacactcagcatcacc
aggaagtgcttccgacacctggccctcgactacgtacttcagattaacgtccttcaagcc
aagaagaagtttgagatcctagatgctatgctgtccttcatgcatgcccagtactccctc
tttcagcagggctacaacctgctggatgagattgacccctacatgaagaagctggctgct
gagttggatcagttggtgattgactcggccatggagaagagggatatggaacacaagcac
gccaccgtacagcagaggactctcatgcaggacttctcgtatgacgactcaaaggtggag
ttgttcaacgtggacgctcccaatggcgtggtgatggaggggtacctgttcaagagggcc
agcaatgctttcaagacctggaaccggcggtggttttccatccagaacagtcagctggtc
tatcagaagaagctgaaggattccctgacggtggtggtggaggacctcaggctttgctct
gtcaagccctgtgaggacattgagaggaggttctgcttcgaggttgtctcccccaccaag
agctgtatgctccaagcggagtcggacaagcttcggctagcctggatccaagcagtgcag
gccagcattgcctcggcatacagggagagcccagactaccattatgtcgaacgcctggac
aggaccgcctcgccgtctgtcagcagtatcgactcggccagtgagcctcgggagcgtagc
atgaggggggagagtattctgcaccgcatccagtgtctcccgggcaacgagtattgctgt
gactgtggccaggctgacccgcgctgggcctccatcaacctgggcatcctgctttgcatc
gagtgctccggcatccacaggagtttgggggttcactgctccaaggtgcgctctctaacg
ttggactcatgggaacctgagttactcaagttaatgtgcgagctgggtaacagtgtcatc
aaccacatctatgagggagcatgtgaggagcagggcctgaagaaaccagggccctcaagt
tccaggcaagagaaggaggcgtggatcaaatctaagtacgtggagaagaagttcctgaag
aagttgggggccaccgaggtgctggtgaacggcgggcgaaagtcagcgcgccggtggagt
gtgaagaagtgccggagacacaacagtgccaccacagtgcccaagacccgacggaaatat
cgccaggagcttggtagcgcctcccctgccaccctctcctcggcggcttcagctctagag
aggaagttccggcgagagtcactgttttgtccagatgagctggacaacctcttctcttac
ttcgacacgggatctgggcctcgtagccctgcaggtctgagcagtgacagtggcctgggt
ggcagtacagacggcagcacagacatcctagtgttcggctcagtggtggacagtgtcaca
gaggaggagcgtgaggtgtcagaggactctagcggagaggctgagatggagccggagcct
gagacccagtcggacccagaggataggcgtgagctccaccctggggcgctgctttacaag
gcctcccaggcacgcaacctgcccgtcatggccgaggcgctggcccacggggctgaggtc
aactccgtcaacgacgaggatgatggcaagagcccactcatacaggctgtgattgggggc
tctttgatagcctgtgagttcctgctccagaatgcagctgacgtcaaccaaagagacgca
aaggggagggggccactgcaccacgccacatatctgggacacacagggcaggtgtgtttg
ttcctgaagagaggagccacgcagaacgacggggacgaggatggccaggatcctctgagt
atcgctgtgcaggcagccaacgcagacatcgtcaccttgttgcgtctggccaggatgaac
gaggagatgcgggagtcggagggaccgttcggccagccaggagacactacttacctggat
atcttccgagagttttctcacatggcctcacacaacccagagaagctgaagcggaggagt
gtgcatttcagacactctttcaggtag
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