Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368583
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Entry
139368583 CDS
T10872
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139368583
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
139368583
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
FOG1-like_PR
Zn_ribbon_PRDM4
Dimer_Tnp_hAT
DUF4954
Motif
Other DBs
NCBI-GeneID:
139368583
NCBI-ProteinID:
XP_070963723
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All DBs
Position
2:complement(47140128..47162695)
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AA seq
1147 aa
AA seq
DB search
MNYVGLNLHSVGPLPSTMAASSAYQTEPSSEAGPNSSTSLIKDECESEEPSKKLKVDHEH
GANESHQKVDFWFCEECKEYFLEECPNHGPPVFVPDTPVALGVPNRASLTVPSGIELVRE
EEEVDVCCIDAGIPKGALFGPYQGELVSKDYSSGFFSWMIVDENNTYKSIDGSDETKANW
MRYIRNSSDENERNMTAFQHGEHIYFRVCRQLSAGEKLRVWYSDDYMRRLHSVSQDSIGH
NLDTGLLTVGKSEAREETKGRVLRSALHGRCSLSKHTSEEGDGQPQAKKKKIDLIFKDVL
EASLEASKSQENPLNSTFSMRRTRAQRVTLTSQRGESYLAQEECKVTGLGLHPSEHLEGG
FNVRCLKMEDSEDDPGQIHEEPSTSFCPNCVKLKRRIRELEAEVIRLRGGNQVEVPPHPE
LAPIDELQAEAMTPIPVVLDEDDQDVDSADESITADLMVAAEDSSKLLAGPGRRIRRFKQ
EWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKC
LQLYKLRMHPEKTEEMCRNMMLLFNAAYHLALEGRPFSDLRALAELLKKCELKVVDQYMN
EGDCQILIHHIARALKEDLAERIRLSPFLSVIMDGQNDDLLSDTVAVYVQFTTSEGPPAT
EFLSLQRLSVGSVDGYLQAIDRAFAVLGLKLQDMLVAGLGVDGSNISSSLRANLYIAVRK
KLPWILCLPVMIHRPHLEVLDAISGKELSCLEDLENNLKQLLSFYRYSPRMMAELRSTAP
TLSEETEFLGDIRAVSWIIGEPNVLNALIKDYLEVVAHLKDISGQTQRADAAAIALTLLQ
FLMDYQSVKLIYFLLDVIAVLSRLAFIFQGDYLLVSQVDAKIEEAIHEIGQLVDCPGEYL
QEFEENFRESFNGVDLNNLRVAESKFQSIREKICQKSQGILSQRLDMHSRTVVKACRVLD
LTTWPRNRDDLRAFGEEEILLIFDHLEAIPSAVRETSRDRTDARGSLLVEWRDLKADYYS
MNGFKEVVSQISRHKQRFPLLNRILQVVRVLPTSTTCCDKGRGSLQKVRKNNRSRLTLDQ
MNDLLTLAVNGPPIANFDGKRPLDSWFEEKSGNSYSLSAEMLNRMSANEQKYVLHSMDVN
TEFYPDI
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgtgggactgaatttgcactcagtgggcccacttccctccacaatggcagca
tcgtctgcctatcaaaccgagccatcctcagaagccgggcccaacagcagcaccagccta
atcaaagacgagtgtgagtccgaagaaccaagcaagaaactcaaggttgatcacgagcac
ggtgccaatgagagccaccaaaaagtagacttctggttctgtgaggagtgcaaagagtat
ttcttggaggaatgcccaaaccatggtcctccggtctttgtgccagacacaccagtggca
ctgggggtacccaaccgggcttccctcacagtgccctcgggaatagagctcgtccgggag
gaggaggaggtggatgtgtgctgcatagatgcgggcatccccaagggggcgctctttggc
ccgtatcagggggagttggtatctaaagactattcctcagggtttttctcttggatgatc
gttgatgagaacaacacatacaaatccattgatggcagtgatgaaactaaagccaactgg
atgaggtatatacgtaattcgtcggatgagaatgagaggaacatgactgccttccagcat
ggagagcatatatatttccgtgtgtgtcggcagttgtcagcaggagagaagctccgcgtg
tggtacagcgatgactacatgaggcggctacacagtgtctcgcaggacagtattggccac
aacctggacacaggcctgttgactgttgggaaatccgaggcccgggaggagaccaaagga
cgtgtgctcaggtcggctctgcatggcaggtgcagcctcagcaagcacaccagcgaggag
ggggacggccaaccacaggccaagaagaaaaagatcgacctcatctttaaagatgtcctg
gaagcctctctggaggcctccaagagccaggaaaaccccctgaacagcaccttctccatg
aggcggaccagagctcagcgcgtcacgctcacttcccagagaggggagtcctatctggcc
caggaggaatgcaaagtgactggtctgggtctccacccatcagagcacctagaggggggc
tttaatgttcggtgtctgaagatggaggattccgaagacgaccctggtcagattcatgag
gagccttctacctcgttctgccccaactgtgtgaagctgaagaggaggattcgggagctg
gaggcagaggtgattcgtctgaggggaggaaaccaggtggaggtaccaccccaccctgag
ctggcaccaatagatgagctccaagctgaggccatgacccctattcctgtggtgctggat
gaggatgatcaggatgtggactctgcagatgagtccatcactgctgacctcatggtggct
gctgaagactcctccaagctgttggctgggcctggccgacgtatacgccgcttcaagcag
gaatggctcaagaagttctggttcctgcgctactcgccaacactcaacgagatgtggtgt
catgtctgccgccagtataccgtccagtcctcacgcacctccgccttcatcatcggctcc
aagcagttcaagatccacactatcaagctgcacagccaaagcaacctgcacaaaaagtgc
ctgcagctatacaagcttcggatgcacccggagaagacagaggagatgtgtcgtaacatg
atgctgctgttcaatgctgcttaccacctggcactggagggccgacccttctcagacctg
cgagcgctggctgagttgctcaagaagtgcgagctcaaggtggtcgaccagtacatgaac
gaaggtgactgccagatcctcatccaccatatcgccagggcgcttaaggaagacctggcg
gagaggatacgcctgtcgcccttcctcagtgtcatcatggacgggcaaaacgatgacttg
ctgtcagacaccgttgccgtctatgtgcagttcaccaccagcgaaggaccccctgccaca
gagttcctctccctacagaggctaagtgttggcagtgtggatggctacctccaggccatt
gatcgggcctttgctgtgcttggtctgaagcttcaggacatgctggtggccggtctgggg
gtcgatggctccaacatctcctccagtttgagagcaaatctgtacattgcggtacggaag
aagctcccctggatcctctgcttgccggtcatgatccatcgtcctcacctggaggtgctg
gatgccatcagtgggaaggagctgtcctgcctggaggaccttgaaaacaacctgaagcag
ctgctgagcttctaccggtactcccctcgcatgatggccgagctcaggtctaccgccccc
acgctgtctgaggagacagagttcctgggagatatacgagccgtcagctggattatagga
gagccaaacgtcctgaatgcccttatcaaagattacctggaggtggtggcgcacctcaag
gacatcagcggccaaacgcagagggcagatgcagctgccatcgccttgaccctgcttcaa
ttcctcatggattaccagtctgtcaagctaatatactttctcctggatgtcatcgctgtt
ctttcgcgtctggccttcatctttcagggggactacctgctggtgtctcaggtagatgcc
aaaatcgaagaggccatccatgagatcggtcagctggtggactgccctggggagtatctg
caggagtttgaggagaacttccgcgaaagcttcaatggcgtagacctgaataacttgcgc
gtcgccgagtccaagttccaatccatccgcgaaaagatctgccagaagagccagggaatc
ttgtcccagcgacttgacatgcacagccgcacggtggtcaaggcgtgccgtgtgcttgac
ctcaccacctggccacgcaacagggatgacctacgagcctttggggaggaagagatcctg
ctcatttttgaccaccttgaagcgatcccctcggctgtccgggagacgtcgcgggacaga
actgacgctcggggcagcctgctggtggagtggagggacctcaaagccgactactacagc
atgaatggcttcaaggaggtggtcagtcaaatctccaggcacaagcagcgcttccctctg
cttaaccgcatactccaagttgtcagggtcttgcccacttccaccacctgctgtgacaag
ggccgtgggtccctgcagaaagtgcgcaagaacaaccgctcaaggctgacgctggaccag
atgaatgacctactgacccttgcagtcaacgggccgccaatagcaaacttcgatggcaag
cgaccattggacagctggtttgaggagaagtctggcaacagctattcactctcagccgaa
atgctgaatagaatgtcggctaatgaacaaaagtatgttctgcacagcatggatgtgaac
acagagttctaccctgatatttga
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