Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368595
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Entry
139368595 CDS
T10872
Name
(RefSeq) leiomodin-3
KO
K22030
leiomodin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139368595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139368595
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
139368595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
DUF4810
LRR_6
Motif
Other DBs
NCBI-GeneID:
139368595
NCBI-ProteinID:
XP_070963751
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Position
16:complement(46601558..46608708)
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AA seq
721 aa
AA seq
DB search
MSSQRDRDMEDIHEEDIDEDDILASLSPEELQELQKEMDVLAPDDRVPLGQRQKDQKKEK
PSADSDEEEDIDEDDILAKLSPEELKELQKEMDVIAPDERVPVGQRQKSQTEKVPTGSFD
HRGLVDYLYWEKESKRMLEEERIPVTLLPSKKTMEEDAEKKEIAEDLETVCEVVEEVIEV
EATDSVEGEEVIEEIIEVMIVEEEEEEDVKKEKEEQEKKDMPVKDERVIEKQPVNEHLKE
SPDDNSTNTVNTTSPLQPPPESADMKENKDIERTEQKSTSQIPEKVKSNTTDATAPEEIE
MTPEEKRACFVPEKEVRVINKLNIPKLALGGGLGGLGGAKKTSRPSGNETNLDTTLDKIR
NNNPAITDVNLNNIENIPKEMLIEYVDALKKNKHVKTFSIANTGADENIAFTLANMLREN
RSITTLNIESNFITGKGIIAIIRCLQFNETLTELRFHNQRHMLGHHAEMEVSRLLKANNT
LLKMGYHFEQAGPRMVVTNLLTRNLDRQRQQRNEEQSKQQQQQQKEVFEMYERALNLPPG
LLAMLGYVPPEIEALMPQLPKGPQGPMEPKPEKQPNTSPQYQHKQFKHMQCNPIPQQPPS
TDSSGNLLKDIQLKRTPKKRDPFLDIDLREDRRAERPNVQLRKTSGKTRDTGVDEMVELK
ATLKDVMKTLKPVPRRRQPAKVDVTPRDELLNEIKKSNVAYLKAVPLPKELESRETSLFN
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccaaagggaccgggacatggaggacatccatgaggaagacattgatgaagat
gatatcctagccagcttgtctcctgaggagcttcaagaactccagaaagagatggacgtt
ttagcaccagacgacagagtaccgcttggtcagagacagaaggaccagaagaaagagaag
ccatccgccgactctgatgaggaagaagacattgatgaagatgatatcctggcaaaattg
tctcctgaggagctcaaagagctccagaaagagatggacgttatagccccggatgagagg
gtacctgtgggtcagaggcagaagagccagacagagaaggtgcccacaggttcgtttgat
cacaggggcctggtggattatctgtactgggagaaggagtccaaacgcatgctggaggag
gagaggatccccgtcactctactgcccagtaagaaaactatggaagaggatgctgaaaag
aaagaaatcgctgaagacttggagactgtgtgtgaggtggtagaagaagtcatcgaggtg
gaagctacagacagtgttgaaggagaggaagtgatagaggagattatagaggtaatgatt
gtggaggaggaggaggaagaggatgtgaagaaggagaaagaggaacaggagaaaaaggac
atgcccgtaaaagatgaaagggtcatagaaaaacagccagtgaatgagcatctaaaagag
tcaccggatgataacagcactaacactgtgaacacgaccagtcctctgcaacccccacca
gagtccgcagacatgaaagaaaataaagacattgagagaacagagcaaaagagcacatca
caaatacccgagaaagtaaaaagtaacaccacagatgctaccgctcctgaagaaatagag
atgactccagaggagaagagggcctgttttgttccagagaaagaggtgagggtaattaac
aaactaaatattccaaagctggcccttggtgggggccttggtggccttggtggggccaag
aagacatcaagaccctcagggaatgagacaaacctggacaccactctggataagatccgc
aacaacaaccccgctatcacagacgtaaacctgaataacatagaaaacattcccaaagaa
atgctaatagaatacgttgatgccttgaagaagaacaaacacgtcaagaccttcagcata
gccaacaccggcgcagacgaaaacattgccttcaccctggccaacatgctgagagagaac
cgtagcatcaccacactgaacatagagtctaacttcataacagggaagggcattattgcc
attatccgctgcctacagttcaacgagacgctcactgagctccgcttccacaaccagaga
cacatgctgggacaccacgcggagatggaggtgtcacgcctgctcaaggccaacaacacc
ctcctgaagatgggctaccactttgagcaggcgggtcccagaatggtggtaaccaacctg
ctgaccaggaacctggaccgccagagacagcagaggaacgaggagcagagcaagcagcag
cagcagcagcagaaagaggtgtttgagatgtacgaacgggctctgaacctgcccccaggg
ctgctggcgatgctgggctatgtccctcccgaaatcgaggccctcatgccgcagcttccc
aagggtccccagggtcccatggaacccaaaccagaaaagcagccgaacacttctccacag
tatcaacacaagcagtttaaacacatgcagtgcaaccccattccacaacaaccccccagc
acggactcctctggtaaccttctgaaggacatccagctgaagaggacccccaaaaagcgt
gaccctttcctggacatagaccttagggaggacaggagagcagagaggccgaatgtccag
ctcaggaagacatcaggaaaaacgagggacacaggcgttgatgagatggtagaactgaag
gccactctgaaagacgtgatgaagacactgaagcctgtccctcggaggcggcagccggcc
aaggtggatgtgacgccccgtgatgaacttcttaatgagatcaaaaagagcaacgtggcc
tatctcaaagctgtgccactccccaaagaattggaatcaagagaaaccagtctcttcaat
ctctga
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