Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368616
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Entry
139368616 CDS
T10872
Name
(RefSeq) bridge-like lipid transfer protein family member 3A isoform X1
KO
K28453
bridge-like lipid transfer protein family member 3A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139368616
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139368616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLTP3A_B
VPS13_N
Motif
Other DBs
NCBI-GeneID:
139368616
NCBI-ProteinID:
XP_070963797
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Position
16:47549877..47611283
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AA seq
1353 aa
AA seq
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MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLSNLELDEEVLQNMLDLPTWLAVTR
VYCNKAAIRIQWTKLKTSPICLFLDKVEVEMRTCEEPRAPNGPSPIAITAGQSEYGFAEK
VVEGMSVIINSITIKVQSRAFHASFELWQLQGNSLNPKWQKTDLRYTRITDPKRGEVLTF
KEINWQSLRIEADAIESEDQDLNSTPLRLITNQGRIRIALKRRLKDCNVLASKLLFILDD
LLWVLTDSQLKAVIHYAKSLSEAMEKSAQQRKSMAAKSLQTAPPSPGIHSLWTNPPPSPS
GGVPSTLDQYFDQHDVKESSYHTFISRLDLHICNDSSSADPDEPPPPCPHGAMQLTFRKL
GFDYYPIHRPGDGCRHWERHCGAMDARAQWAGILLQEFQRRVEASGIPGPDSKVPNQAKD
FPAKRTQDGQPTPKASPPEREQISKRTSIAQPLPLNPLKRLRSSCVVVRMDDLDIHQVST
GGCHSKKTPSLISCNRKALNLADNIPAIHLQFTEYYFPDNPGLPVPNTNLYAQLNGLQLC
LDPASLLWVNLFSRGLLRTLEQVKAFYHLQDSSKAEEHIDIHMDAAQIKLIIPLESSIMD
HQDRPQSLSITVPQIVLSNTRHSPHGTRADLHTTYSSFSTCHFFQSTPPCSFPRDQSSFL
PLPSAFLQHSLEMEPLSLSERRPLRPKDVWFFSLSHLSMSFEGARKSNRGRAHPFVEPFT
ISVWMCRPSAFKVSSLVSSPNEPAPVDPNHKTPEQQENHLPPNLEHNQDSRQEVAVASIH
FLVQAITPVKVWLNHYQYVALLRMKDTLARLGHELGRDTRDAKQARGQEADPPTMCLALL
MDSVELGLLLPPAATEPEEAHTQGSESPSLTDSDLSPTHQATSPGLLEDSGIGNTTATVN
SSPPLEQEVDGVVEEASEAVEVMEGEMAQGDGSGPVLSPPFSPEHHHSLLSRDPSTFSLE
GELSTALTSTKDVTKDAFSASLDLTKGAFSITKDAFSFMSRGSGMSKLFNPQAKEQRPEE
GSPIASLRLQSMNQSLSQHSFDSAILDGSLPNDHLSVENDASENFAILMDDSGVVSMMRT
NGTPGPSGGSPALGTEGGSSADLSSSLSQSIEDITQDTSSVLLLVLSGMACVADLKGEDL
VVAVEAQDLILRQMGNVRFSDLLAELMPVPGGSTVGHRQGCRAVPVVGIRMEMGPSAARH
SSLSELVGHLELGVRDCRVDLLVSTLATLGPFLEDELSADIQPIKIRLENVTITLKDDGP
KVYPTAPQPQPVTFTVDQVVVERSDDGILRIKGGEGTVPRDSAGGAVVCLEKPITNTSLE
SQLSEAQSALSQALTDRERLLLEVRKYDPMFDL
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaataatcaaaaagcaaatattgaaacatttgtccaggttcaccaagaacctg
tccccagacaagatcaacctcagcacgctgaagggcgagggtcagctgtccaatctggag
ctggatgaggaggtgctgcagaacatgctggaccttcccacctggttggctgtcacccgg
gtctactgcaacaaggctgcaatcaggatacagtggacaaagttgaagaccagccctatt
tgcctgttcctggacaaagtagaagtggagatgagaacgtgtgaggagccccgggcccca
aatggcccctcccctattgccatcactgctggccagagtgagtatggctttgctgagaag
gtggtggagggtatgtcagtcatcatcaactctatcaccatcaaggtgcagtcccgtgcc
ttccacgcctccttcgagctctggcagctccagggtaacagtctcaaccccaaatggcag
aagactgacctccgctacacccgcatcacagacccaaaaagaggagaggtgttgacgttt
aaggagatcaactggcagagtctgcgtatcgaggccgatgccatagagagtgaggaccag
gacctgaacagtaccccactacgcctcatcaccaaccagggacgcatccgcattgccttg
aagcgcaggctgaaggactgtaacgtgctggcctctaagctactcttcatcctggatgac
ctgctgtgggtgctgacggactctcagctcaaagctgtcatccactacgccaagtccctg
agtgaggctatggagaagtctgcccagcagaggaagagcatggccgcaaagtccctacag
actgcaccaccttcccctggtatacactctctatggacaaaccctccaccctctcccagt
ggtggagtccccagtaccctggaccagtactttgatcaacacgatgtcaaagagtcctcc
taccacaccttcatctctcgtctagacctgcacatatgcaacgacagttcctcagcagac
cccgatgagcctcctcctccatgcccccatggtgcaatgcagctgaccttccgcaagctt
ggttttgactactaccccatccacaggcctggtgatggctgtcggcattgggagcgtcat
tgtggggcgatggatgcccgggcccagtgggctggcatactactgcaggagtttcagagg
agggtggaagcatcagggatccctgggccagactctaaggtccccaaccaggccaaggac
ttccctgccaagaggacccaggatggacaacccacccccaaggccagccctcctgaaagg
gagcagatctccaagaggacctcaatagcacaacctctcccgttgaaccctcttaagagg
ctccgctccagctgtgtggtggtacgaatggatgacctggatatacatcaggtgtctaca
gggggatgccacagcaagaagaccccgtccttaatatcctgtaaccgcaaggccctgaac
ctagcagacaatataccagccatccacctgcaattcacagagtattacttccctgacaac
cccggtttgcctgtacccaatactaacctatatgcccaactgaacggcctacagctgtgc
ctggacccagccagtctgctgtgggtcaacctgttctctaggggcctactgcgtaccctg
gagcaggtcaaagccttctaccacctccaggacagcagcaaggcagaggagcacatagac
atccacatggacgcagctcagatcaagctgatcattcccctggagtcgtccatcatggac
caccaggaccggccccagtccctaagcatcaccgttccccagatcgtcctcagcaacaca
cgccactccccccacggcacccgggccgacctccacaccacctacagcagcttctccacc
tgccacttcttccagtcaactcccccttgctccttcccccgagaccagagctccttcctc
cccctaccctctgccttcctccagcactccctggagatggagcccctgtccctgtctgag
aggaggcccctaaggcccaaggatgtctggttcttcagcctgtcccatctgtccatgagc
ttcgagggggcgcggaaaagcaacaggggcagagctcaccccttcgtggagcctttcacc
atttctgtgtggatgtgtcgtccatctgcgtttaaggtcagttccctagtctcctccccc
aatgaaccagctcctgttgatcccaaccataaaaccccagaacagcaggaaaaccacctc
ccgcccaacctggaacacaaccaggacagtcgacaggaggttgcagtggcttctatccac
ttcctggtccaggccatcacaccggtcaaggtgtggctcaaccactaccagtatgttgcc
ctgttgcggatgaaggacaccctggccaggctggggcacgagctgggccgggacaccagg
gacgctaagcaggccaggggccaggaggctgacccccctacgatgtgcctagccctccta
atggactcagtggagctggggctcctgctaccacctgcagccactgagccagaggaggcc
cacacccaagggtctgaaagccccagcctgacagactccgatctctcccccactcaccag
gctacttcgccaggccttctggaagacagtgggataggaaacaccactgccaccgtcaac
agctctcctccccttgagcaggaggtggatggtgtagtagaggaggccagcgaggcagtg
gaggtcatggagggggagatggcccagggggatggcagtggtcctgttctctctcctccc
ttctcccctgaacaccatcactccctcctgtccagggacccctctaccttcagcctggag
ggagagctgtccactgccctcacctccaccaaggacgtcaccaaagatgcctttagtgcc
tccctggacctgactaaaggggcgttctccatcacaaaagatgccttcagcttcatgagt
cgcgggtcggggatgagcaagctgttcaatccacaggcgaaggagcagcgccctgaggag
gggtcccccatagccagcctgcggctccagtccatgaaccagtctctctcgcagcactca
tttgacagtgctatcctggatggcagcctgcccaacgaccacctctcagtggaaaacgac
gccagtgagaactttgccatcctcatggatgactcaggggtagtgtccatgatgcgaacc
aacggcaccccggggcccagtggaggcagtcctgccctggggacagagggggggtcctca
gctgacctgagcagctccctgtcccagagcattgaggacatcacacaggacacatcctct
gtgttattgctggtgctcagtgggatggcctgtgtggcagacctgaagggagaggacctg
gtggtggcagtggaggcccaggatctcatcctaagacagatgggcaacgtcaggttctct
gacctgctggctgaactgatgccagtgcctggtgggtctaccgttggccacaggcaaggc
tgcagggcagttcccgtggtgggcatacggatggagatgggtccttctgcagcgcggcat
agttctctgtctgagttggtgggtcacctggagctgggtgtgcgagactgtcgggtggat
ctgttggtttctaccctggccaccttggggcccttcctggaggatgagctcagtgctgac
atccaacccattaagatccggctggaaaacgtcactatcactctgaaggatgatggtccc
aaggtctaccccacggccccccagccccaacctgtcacctttaccgtagaccaggtggtt
gtggagcgatctgatgacggcattttgagaatcaaaggtggtgaaggcacagtcccaaga
gactcagcaggtggtgctgtggtatgtttggagaagccgatcacgaatacttccctggag
tcgcagctatcggaagctcagtcggctctctctcaagccctcactgaccgagagcgtctc
ctcttggaagtcaggaagtatgaccccatgtttgacctgtga
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