Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368625
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Entry
139368625 CDS
T10872
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139368625
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139368625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
DUF5076
pre-PUA_NIP7
SAE2
Motif
Other DBs
NCBI-GeneID:
139368625
NCBI-ProteinID:
XP_070963820
LinkDB
All DBs
Position
16:complement(48130590..48135459)
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AA seq
331 aa
AA seq
DB search
MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHSSLIVKVWHRELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFAKDFETVLVDACSHVAREADDGCRRPMDRLLTIWQERSLYKVE
FIQQLKLAIEDSNSPQHQPTEEKKAPKRTYQKIQELEEEEDDDDYRGHMSPQDSDISGPQ
LTEELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAADKLSKTVDEACL
LLAEYNGRLAAELEDRRQLARMLTEYIGSQKEALTEREKKLEEYKQKLARVTQVRKDLKS
HIQSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattttctgagtctgcgttggagaagaagctttcggagctcagcaactctcag
cagagcgttcagacgctgtctctgtggatcattcatcatcgcaaacactcgtcgctcatc
gtcaaagtatggcacagagaactgaagaaagcaaaaagcagcaggaagttgactttcctt
tatcttgccaatgatgtgattcaaaacagcaagaagaaaggtccagagttcgccaaagac
tttgagacagtccttgttgatgcttgctctcatgttgcaagagaggctgatgatggctgt
agaaggcccatggacaggctgctcactatctggcaggagcgcagcctctacaaggtagag
ttcatccagcagctgaagcttgccatcgaagactctaacagcccccaacaccaacccaca
gaagagaagaaggcccctaaacggacctatcagaaaatccaggagctggaagaagaggaa
gacgatgacgactacaggggccacatgtccccacaggattcagacatctcagggccacag
ctgacagaggagctggtcaaagccctgcaggacctggagaatgcggcctcgggtgatgct
gctgtgcgccagaagattgcctctctgccacaggaggtgcaggatgtgtccctgctagag
aagattactgataaggaggcagctgataaactgtccaagacggtggatgaggcctgtcta
ctgctggctgagtataacggacgtctggctgctgagctggaggacaggaggcagctggcg
cgcatgctgacagagtacatcggtagccagaaggaagccctcaccgagagggagaagaaa
ctggaggagtacaaacagaagctggcacgggtcacacaggtgcgcaaggacctcaagtcc
cacatccagagcctgcctgacctctctctgctgcccaatgtgacgggaggtctggcccct
ctaccctctgctggagacctgttctccaccgactga
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