KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368651
Entry
139368651         CDS       T10872                                 
Name
(RefSeq) integrin alpha-11 isoform X1
  KO
K06587  integrin alpha 11
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510  Focal adhesion
ocla04512  ECM-receptor interaction
ocla04518  Integrin signaling
ocla04810  Regulation of actin cytoskeleton
ocla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139368651
   04518 Integrin signaling
    139368651
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    139368651
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    139368651
   04810 Regulation of actin cytoskeleton
    139368651
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ocla04515]
    139368651
Cell adhesion molecules [BR:ocla04515]
 Integrins
  Integrin alpha subunits
   139368651
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 VWA_2 Integrin_A_Ig_2 FG-GAP_3 FG-GAP_2 ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 139368651
NCBI-ProteinID: XP_070963915
LinkDB
Position
2:47597952..47688992
AA seq 1189 aa
MEYYCSLLLWTCALLPGLRQCFNFDTKKYKIIEGSKEAQFGYTVQQHEAGGRKWLLVGAP
FETSGQHQTGDIYKCPMDTSPNTNCTRLNLGKVSLNNVSERKDKMRLGMTLTSNPKDNSF
VTCGPLWSYECGSSYYSTGICSRVNESFKFSKTISPAFQRCETYMDIMIVLDGSNSIYPW
YEVQDFLINILQKFYIGPGQIQVGVVQYGSRVVHEFTLNDFRSVEEVVEAAKTIDQRGGE
ETRTALGINVARTEGFKRGGRKGAKKVMLVITDGESHDSPDLQKAMEDTEADNITMYAIA
VLGYYNRRGINPEAFLKEIKYIASDPDDKHFFNVTDESALKDIVDALGERIFSLEGVNPN
GTGFGLQMSQAGFSSHIVEDGILVGAVGAYDWNGAVLKETRHGKVVPPKSSYLEEFPEEL
KNHGAYLGYTVNSVVSAKGRQLYVAGAPRFNHTGKVIIFTLRNNGNLTILHSLKGQQIGS
YYGSELAPLDIDGDGVTDFLLVAAPMFFSKGWERGKVYIYRLTQQNHFLLEGTLEVSDQS
QNSRFGGAMAPIPDMNGDSYSEVVVGAPLEDDHQGAIYLFYGQLSGIQHKYRQRIGAAGF
SAGLQYFGRSVHGMMDVNEDGLVDLAVGALGAAVLIWSRSVVRIQGKITFEPEKINTFNK
DCRRGGKDVTCMSAIVCISLDARTRMQSHGVGVWYRVLIDERRHPPRASLDDNDRQQQSR
NLTLQHGEESCEHVHFYVQETADYGHPIVFVVKVGLQSPDQGPVLDHGWPTTFRTEIPFW
NGCEGDDSCVPDLILHSRTDLLDRRQFCRPRERAAWALCHHQGASVASERVVEASRRRLV
VEARLENQGENAYGTTLNISHSHNLLFSSLIVKDHSDIQIECRAEDRERNDRTCNVSSPF
MRSLTQVSFRLEFELSHSVFLDHVRVVLQAASDGEEMSPEDNINNIFHPLKYEADLLFTR
DSKPPRFEINSDHYRNKPGSSGPMFNLTYHIQNLGFFPVTDLQFAVDVFAVTKSGNHLFQ
IANIDTDQAVSSNCVLPHHMTPNLVFPEDLSHVPQLNHSNSMMLPMQCRLNLPAYREVRV
TVRGRLHLQALFAVKFKTLELVTAASIELSPSSPVFLHEERPTRHIILEMRKEEDYKIPI
WIIVGSTLGGLLLLALLILALWKLGFFNRQKQREEEEEQVANGKMPEER
NT seq 3570 nt   +upstreamnt  +downstreamnt
atggaatactactgcagcctgctgctgtggacctgtgccctcctgccaggccttcggcaa
tgcttcaattttgacacaaagaagtacaagatcattgaaggctccaaagaggcccagttt
gggtacacagtacagcagcatgaggcaggaggacggaagtggctactagttggagctccc
tttgaaaccagtggccaacaccagacaggcgatatatacaaatgcccgatggacaccagt
cccaacaccaactgcactagactcaacctaggaaaggtatccctgaacaatgtgtcagag
cgcaaggacaaaatgaggctgggcatgacactgacctccaaccctaaggacaacagcttt
gtgacctgtggtcctctgtggtcgtacgaatgtggaagctcctactacagcacaggcatc
tgctccagggttaacgaaagcttcaagttctccaaaaccatctcgccggcctttcagagg
tgcgagacctacatggacataatgattgtcctggacgggtccaactccatctacccctgg
tatgaggtgcaggacttcctcatcaacattctgcagaagttctacattgggccaggtcag
atccaggttggagtggtgcagtatgggtcaagggtggtccatgagttcaccctgaatgac
tttcgctctgtggaggaggtggtagaagcagccaagaccatcgaccaacggggaggggag
gagacacgcacggccctgggcatcaatgtggcacggacggagggatttaaacggggaggt
cggaaaggggctaagaaagtgatgctcgtgatcacggatggtgaatcccacgacagccct
gacctgcagaaggccatggaggacactgaggcggacaacatcaccatgtatgccatcgct
gtattgggctactacaatcggcgcgggataaacccagaggccttcttgaaagagatcaag
tatatcgccagcgatcctgacgacaaacacttcttcaatgtgactgatgagtcggcgcta
aaggacatagtggacgccctgggagagaggatcttcagtctcgagggagtgaaccctaat
gggacggggttcggtctgcagatgtctcaggcaggcttctcatcacacatagtggaggat
ggcatattggtgggggccgtgggggcctatgactggaacggggctgttctgaaagagaca
cgtcatgggaaggtagtcccacccaagtcctcctatctggaagagttcccagaagaactg
aagaaccatggggcctacttgggttacacagtaaattcagtggtgtcagccaaaggcagg
cagctctatgttgctggagcccctcgcttcaaccacacaggcaaagtcatcatctttacc
ctgagaaacaatggcaacctcaccatcctacactcactcaaaggccagcagattgggtca
tactacgggagtgagctagctcctctggacatcgatggggacggtgtgacagacttcctc
ctggtggcagcgcccatgttcttcagtaagggctgggagaggggcaaggtctacatctac
aggctgactcagcagaaccatttccttttggaagggacacttgaggtctccgaccagtcc
cagaactctcgtttcggtggagcgatggcccctatccctgatatgaatggtgactcgtac
agtgaggtagtggtgggagctcctctagaggacgatcaccagggggccatctacctgttc
tacggccagctcagtggcatacaacacaaatacagacagagaattggagcagcaggcttc
tctgctggtctgcagtattttggccgcagtgttcatgggatgatggatgtcaatgaagac
gggttggtggacttggcagtgggcgcattgggtgcagcagtactgatctggtctcgcagt
gtggtgcgcatccaaggaaaaatcacttttgaaccggaaaagatcaacaccttcaacaag
gactgccgcaggggaggcaaggacgtcacctgcatgtctgccatcgtgtgtatcagtctg
gatgccaggactcggatgcagagccatggagtgggtgtgtggtacagggtgctgatagac
gagaggaggcaccctcccagagcatcgctggacgacaatgacagacagcagcagtcaagg
aatctgacactacaacacggggaggagtcctgtgaacatgtccacttctatgttcaggaa
actgcagactacggccatcccatagtgtttgtggtgaaggtaggtctgcagagtccagac
caaggcccggtgctggaccacggctggcccactacctttaggactgagatccccttctgg
aatggctgcgagggggatgacagctgtgtccctgacctcatcctgcacagtcggacagac
cttctagaccgcaggcagttctgtaggccaagggagcgggccgcatgggcgctgtgtcac
caccagggggcctcggtggcctcggagcgagtggtggaggcatcacgcaggaggctggtg
gtagaagctcgtctggagaaccaaggagagaacgcctatggcaccacgctcaacatctcc
cactcccacaacctgctcttctccagtctcatagtcaaggaccactcagacatccagatt
gaatgtcgtgctgaggacagggagaggaacgacaggacctgcaatgtcagctcacccttt
atgaggtcactgacccaggtgtctttccggctggagtttgagttgagtcactctgtcttc
ctggaccatgtgagggttgtcctgcaggctgccagcgatggggaggagatgagcccagag
gacaacatcaacaacatatttcatcctctgaagtacgaggcagacctcctgttcacaagg
gactccaagcctcctcgttttgagatcaactcagaccactaccggaacaaacccggcagc
agtggtccaatgtttaaccttacttatcacatacagaatctgggcttcttcccagtgaca
gacttgcagttcgctgttgacgtgtttgctgttacaaagagtggtaaccatctcttccag
attgccaatatcgacactgaccaggcggttagctctaactgtgtcctcccacatcacatg
actccaaaccttgttttccctgaagatctctcacacgtcccacagctgaatcactccaac
agcatgatgttgccaatgcagtgcagactcaacctgcctgcgtacagggaggtcagagtg
acagtcagggggcgcctgcacctccaagctctctttgctgtgaagtttaaaactctggag
ttggtgacagcagcctccatagaactgagtccgtccagtcccgtgttcctgcatgaggag
aggccaacacggcacataatcctggagatgagaaaggaggaagattacaaaattcccatc
tggattatagtagggagcacactgggtggtctgctgctgctagccttgctcatcctggct
ctatggaagctgggcttcttcaacaggcagaaacagagggaggaagaggaggagcaagta
gccaacgggaagatgccagaggagcgataa

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