Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368658
Help
Entry
139368658 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 17
KO
K10500
zinc finger and BTB domain-containing protein 17
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
139368658
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
139368658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_15
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_6
zf-H2C2_5
BTB_KLHL33
zf-C2HE
zf-BED
HypA
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
139368658
NCBI-ProteinID:
XP_070963920
LinkDB
All DBs
Position
16:complement(50639380..50647019)
Genome browser
AA seq
893 aa
AA seq
DB search
MDFPWHSGKVLEQLNHQRQLGLLCDCTFVVDGEDFKAHKAVLAACSAYFRTLFLDQKDVV
HLDISNAAGLGQVLEFMYTAKLSLSPQNVEDVVAVATFLQMQEIVNACSAYQSLAVSTSQ
TTQYLIDHKIEEGEQNTEKEPSETRSHDEEIPNPSAEDEGPKGFQEDPKETTLDDGQISR
KTPDKKTPGRGRPPKTSTYATQRKAAAESEEVESTAKDVPEFQDDPSDADYTPKLPFKSA
ASRSYMSTRRRRTRRAPRRNLSQDNDSNEGSSAPKTVNEEKKEVEEGELEEEEEEGGGEE
EEVEEQEDEGDEGEDGQGTESGEERKQLRLGAVTDRTESRSYGSVTHKCEDCGKKFTHTG
NFKRHIRIHTGEKPFSCRDCHKAFSDPAACKAHEKTHSPLKPYCCSSCGKSYRQISLLNL
HRKRHTGEARYSCRDCGKLFTTSGNLKRHMLVHSGEKPYHCDYCDRAFSDPTAKMRHLET
HDADKGHRCPHCDKRFNQTGNLKAHLKIHITDGPLKCKECGKQFTTSGNLKRHLRVHSGE
KPYICMHCQRAFSDPGALQRHERIHTGEKPCLCLICGKGFTQASSLIAHVRQHTGEKPYV
CDRCGKRFVQSSQLANHIRHHDNIRPHKCHICNKAFVNVGDLSKHIIIHTGEKPFLCDKC
GRGFNRVDNLRSHVKTVHQGKAGMKRLVVAGGDSDDGGDGFHGGSASEMDDNEINIVTVT
TEDIVTLATGALAGSSVAQLTVVPVASSVSADLVISALKAEITKAVEKVQEADPNTQILY
ACDSCGDKFLDASSLAQHVRIHTAQALVMFQADSDFYQQYAAAAGATAVGEVVTTTWQPT
SEQVIQGGELVFHTREAEEEEEEGGGEVVAQADSQPEGKDEAGTEGEEMECEA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggactttccctggcacagtggcaaggttttggaacagctcaatcaccagcgtcagctg
ggcctgctttgtgactgtacctttgtggtggatggggaggacttcaaggcccacaaggct
gtgctggctgcctgcagcgcctacttccgcaccctcttcctggaccagaaggatgtggtg
cacctggatattagcaacgcagcaggtctgggccaagtccttgagttcatgtacacggcc
aagctgagtctgagtcctcagaatgtggaggatgtggtggcggtggccacgttcctgcag
atgcaggagatagtcaatgcctgttctgcctaccagtctctggcagtctccacatcccag
acaacacaatacttaattgaccacaagattgaggaaggagagcaaaacacggagaaggag
ccgtcagagacaaggtcacatgatgaggaaatcccaaacccctcagcagaggatgaaggg
ccaaagggctttcaggaggacccgaaggagaccaccctggacgatggccagatttccaga
aaaaccccagacaaaaagaccccggggagaggaagaccccccaaaacctccacctacgcc
acacagagaaaagctgcagctgaaagtgaggaggtggagagcaccgccaaagatgtgcct
gagtttcaggatgacccctcggatgcggactacacgcccaagttgccattcaagtctgca
gcatctaggtcttacatgagcaccaggagaagaaggacacggagagctcctcgacgcaac
ctctcacaggataatgactccaatgaggggagtagcgcaccaaagacagtaaatgaagag
aaaaaagaggtggaggagggcgagctggaggaggaggaagaggagggaggtggtgaagaa
gaagaagtagaagagcaggaggatgaaggagatgagggagaagacggccaggggacagag
agcggagaggagaggaagcagctacggttgggtgctgtcaccgaccgcaccgagtcacgg
tcctacggctctgtgactcacaagtgtgaggactgtggaaagaagttcacccacacgggg
aacttcaagagacacattcgcattcacacaggagagaaacctttcagctgccgtgactgc
cacaaggccttctccgacccggctgcctgcaaggctcacgagaaaacacacagccccctg
aaaccttactgctgctcctcatgtgggaagagctaccggcagatcagcctgctcaacttg
caccggaagcgtcacacaggcgaggcccgatacagttgcagagactgcggcaagctcttc
accacgtctggcaacctgaagcgccacatgctggtgcacagcggcgagaagccgtaccac
tgcgactactgcgaccgggccttctccgaccccactgccaagatgcgccacctggagacc
catgatgccgacaagggccataggtgtccgcactgcgacaagcggttcaaccagactggg
aatctaaaggctcacctgaagatccacatcacagacggccctctgaagtgtaaagagtgt
ggcaaacagttcaccacctcagggaatttgaagagacacctgcgtgttcacagtggggag
aagccctatatctgtatgcactgccagagagctttctccgaccccggggcgctacagaga
cacgagcgcatacacacaggggagaagccgtgtctgtgtctgatctgtgggaaggggttc
acccaggccagttcactcatcgctcatgtccgccagcacaccggagagaagccctatgtc
tgcgaccgctgtggcaaaaggtttgtccagtccagtcagctggccaatcacatccgtcac
catgataacatccggccacacaagtgtcacatctgcaacaaggcgtttgtcaacgttggg
gatctctccaagcatatcatcattcacacaggagagaagcccttcctgtgtgacaagtgc
ggccgcgggttcaaccgcgttgacaacctgcgctcccacgtcaagaccgtccaccagggt
aaggccgggatgaagcgcctggtggttgctgggggcgacagcgacgatgggggtgacggg
tttcacggtgggtcggcctcagagatggacgacaacgagatcaacatcgtcaccgtcacc
actgaggacatcgtcaccctggcgacaggggccctggctggcagctctgtggcccagctg
acagtggtgcctgtggcttcatctgtctcagcagatcttgtgatctctgctctaaaagca
gagatcaccaaggctgtggagaaggtgcaggaagcagaccccaacactcagatcctgtat
gcgtgcgactcatgcggtgacaagttcctggatgccagttcgctggcccaacacgtgcga
atccacacggcccaggccctggtcatgttccaggctgactcggacttctaccagcagtac
gccgctgctgcaggagccaccgccgtgggggaagttgttaccacaacctggcaacccacc
tccgagcaggtcatccagggaggggagctcgtcttccacacccgtgaggccgaggaggag
gaggaggagggggggggagaggtggtggcccaagctgactcccagccggaggggaaagat
gaggctggaacagagggagaagagatggagtgtgaggcttag
DBGET
integrated database retrieval system
