Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368670
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Entry
139368670 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139368670
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139368670
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139368670
Protein kinases [BR:
ocla01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
139368670
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139368670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
139368670
NCBI-ProteinID:
XP_070963941
LinkDB
All DBs
Position
16:51123172..51142588
Genome browser
AA seq
1329 aa
AA seq
DB search
MADNKGEEDMESSSKLDSEPQGEDSGDPELKDVIPLIAIETNLKEGEDSQSQENVSQMPK
PANDVVSGGGDASSNSAGTGEEGSISSNVSPVGNTNGGTTELKNVNAVIVIESNSKEGED
SQSQENISQVPTPANVSGGGDASSNSAGAVGEGSTSSSPVGNTNGGTTESSAAGDTAGTS
PALTTDMSPPPTVPPANPVIPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPLPE
RQVTVQVPGPNGQPDTHIVNVMRCVVCCQDCKQSDIIDNYFVKDTTEASKTSDEKSAQMC
TSCEDNADTIGFCAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVGVSEQRPVFC
PIHKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETHMVKLQEKKTY
VHYSHSQVTSRIKEVTDTHKKVEHDIKIAVFTLINEINKKGKYLLQQLESVTKERSMKLL
TQQTDIANLARQILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGA
VRFFCDPTFWAKNVVNLVGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKSPGQINLAQ
LRQQHMQQQAFAQQKQQQQQHQQQQQHQQQQQQQQQQQQQQQQQQQHQQQQQQQQQHQQQ
QHQQQQQHQQRIQEQMRIASQMSQQHPRQAVPQMVQQQPPRLISMQAQQRGPMNGGPNMY
PPHHLRLPPGQGRMPSSSAQPRMPNGQQYSPMMQPQLQRQMTVDSEMSDHRFRLLHLTGH
SNPGHAGPFPVASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIDLIPSVTNPENLP
CLPNIPPIQLEDAGSSSLDALLSRYILASTYPQLGLGPPGNMNLSHGPSTHSPGSSGLSN
SHTPVRPSSTSSTGSRGSCGSAGRPGPASGPMEQQVKVKQEPGAEKECGFSGTTTSNVKT
EQGKDGGRSACMMSSSESRCTPPLPVLGSVTSGSSVQDILKKVGEHVKTEPQDQEACSGA
NRPGNAPITTSSTSTVASAALLTNGKGAASAALRSPRTAQGTNQSGAGGKEDDPNEDWCA
VCNNGGELLCCDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPEMEYQPDDEPRDEK
DNSEQGLSPEDQRRCERLLLYVFCHDLSEGFQEPVPPSIPNYYKIIKKPMDLTLVKQKLQ
LKHVQHYQSPKEFVSDVRLVFSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGKAVSL
YFEERLLELYPDESFPEVPEEPEVPEVPEEPEAPAGEGEEADLTEDSEDEFVQPKRKRLK
TDEKPMHIK
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagctcttccaaattagattcagaacct
cagggagaggatagcggagacccagaattgaaagatgtgattccgctgattgccatagag
acaaatttgaaagaaggagaggattcacaatcccaggagaatgtttcccagatgcctaaa
cccgctaacgacgtcgttagcggaggaggggacgctagcagcaacagcgcgggcacaggg
gaagagggcagcattagcagtaatgttagcccagttgggaacaccaatggtgggacaacc
gaattgaaaaatgtgaatgcggtgattgtcatagagtcgaactcgaaagaaggagaggat
tcacaatcccaggagaatatttcccaggtgcctacacccgctaacgttagcggaggaggg
gacgctagcagcaacagcgcgggcgcagtgggagaaggcagcactagcagcagcccagtt
gggaacaccaatggggggacaaccgagtcctcggctgctggggatactgctggaacctca
ccagcactcacaaccgatatgtccccacctccaacagttccaccagccaaccccgtcatc
ccaataaaccttatggatacttgcgctgtgtgtaaacaaagtctccagacccgtgactgt
gaacctaaactcttaccgtgtcttcactcattttgcttgaaatgtatcccactgccagag
cgacaagttaccgtacaggtgcctgggccgaacggacagccagacacccacatagtgaat
gtcatgcggtgtgtagtttgttgtcaagactgcaaacaaagtgacatcattgacaactac
tttgtcaaggacaccaccgaggcctccaagacttcagatgaaaaatctgcacagatgtgc
accagttgtgaggacaatgccgataccattgggttctgtgcagaatgtggagagtggttg
tgcaaaacctgcatcgaggctcaccagagggtcaaaatcaccaaggaccacaaaatccgc
aagaaagaggatgtctctgaagagtctgtaggtgtgtcggaacagaggcctgtgttctgt
cccatccacaaacaggagcccctgaaactcttctgtgaaacctgtgacacactcacctgc
cgggactgccaactgctggagcataaggagcacaggtaccagtttctggaggaggccttc
cagaaccagaaaggcatcattgagacgcacatggtcaaactgcaggagaaaaagacctat
gttcactactctcactctcaggtgacaagcaggataaaggaagttactgatacccataag
aaggtggaacatgacatcaagatagccgtgttcactcttatcaacgaaatcaacaagaag
ggcaagtatttactgcagcagcttgagagtgtgactaaggagaggagcatgaagctgttg
acccagcagacagacatcgccaacctggccaggcagatcctccatgtgctcaacttcacc
cactctgccattaacagcggcagcagcaccgccctgctttacagcaagaggctgatcatc
taccagctgcgcaaggttctgaaggctggactggaaccagtgcctcaggctaacggagct
gttcgctttttctgtgaccccacattctgggccaagaacgtggtcaacctagtagggaac
ctggtgatcgagaagatgccccaggctcagcaccctcccaacattatggtggggcccatc
tccccgggccacggccatccaggccacggcaaaagccccgggcagatcaatctggcccag
ctccggcagcagcacatgcagcagcaagccttcgcccagcagaaacaacagcagcagcag
caccaacaacagcagcagcaccaacaacaacaacaacagcagcagcaacaacaacagcag
cagcagcaacaacagcagcaccaacaacaacagcagcagcagcagcagcaccaacagcag
cagcaccaacaacagcagcaacaccaacagaggatccaggaacagatgcgtattgcctcc
caaatgtctcagcagcaccccaggcaggctgtacctcagatggtacagcagcagcccccg
cgcctcatcagtatgcaggcccagcagaggggccccatgaacggcgggcccaacatgtac
cccccccaccacctgcgcttgcccccgggacagggccgcatgcccagctccagcgcccag
ccacgcatgcccaacggccagcagtactcccccatgatgcagccccagctgcagagacag
atgactgtagattctgagatgagcgaccacaggtttcgtttgttacatctcactgggcat
tcaaacccaggtcatgctggacccttcccagtggcatctctccacaacgtgagcgctgcc
aaccccaccagtcccaccagtgccagcatggccagcgcccatgcccaccgtggccccgcc
agccccatagtgggcgccatcgacctcatcccctccgtcaccaacccagagaacctgcca
tgcctaccaaacatcccccccattcagctggaagacgcgggctccagcagcctggatgcc
ctactgagtcgctacatcttagccagcacataccctcagctgggcctggggccccccggg
aacatgaacctctcccacggaccctccacacactcccctggctcctcaggcttatcaaac
tcccacacgcctgtgcggccatccagtacgtccagcacaggaagcaggggcagctgtgga
tctgcgggtaggccagggccagcaagcggcccaatggaacagcaggtcaaagtcaagcag
gagcccggagctgagaaggagtgtggtttctcaggaaccaccacctccaacgtcaaaacg
gaacaagggaaggatggagggaggagcgcgtgcatgatgagtagttcagagagcagatgt
actccccctctccccgtgttgggctctgtgacttctggctcctctgtccaggacatcctc
aagaaggtgggggagcatgtcaaaactgagccccaggaccaggaggcctgcagtggggcc
aacaggcctggcaacgcccctatcaccaccagcagcacatccactgtggcctctgccgca
ctgctgaccaatggtaagggagccgcatccgctgccctgcgctctccacgcactgcacag
gggaccaaccagagcggggcaggtgggaaggaggacgaccccaacgaggactggtgtgct
gtgtgcaacaacgggggagagctgctttgctgcgaccgctgccccaaagtcttccacatc
acctgtcacatccccaccttgaagtgctccccgagtggtgagtggatgtgcacgttctgc
cggagcctggcaagcccggagatggagtaccagcctgacgacgagcctcgtgacgagaag
gacaacagtgagcagggcctgagtcctgaggaccagaggaggtgtgagcgcctcctgctg
tatgttttctgccatgatctcagtgaggggttccaggagcctgtccctccctctatccct
aattactacaagatcatcaagaagcccatggacttgaccctggtgaaacagaagctacag
ttgaagcatgtccaacactatcagagcccgaaggagtttgtctcggatgtgcgcctggtc
ttcagcaactgtgccaagtacaatgagatgtctcgaataatccaggtatatgatgaggag
aaacagagtaatgtgcaggcggactccgaggtggcggaggcagggaaagctgtgagtttg
tactttgaggagaggctgctggagctctatccagatgagagtttccctgaggtaccagag
gagcccgaggtaccagaggttcccgaggagcccgaggccccagctggagagggagaggag
gcggatctcacagaagactccgaggatgagtttgtgcagcctaaacgcaagcggttaaaa
acggatgaaaagccgatgcacatcaagtga
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