Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368682
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Entry
139368682 CDS
T10872
Name
(RefSeq) coiled-coil domain-containing protein 22-like isoform X1
KO
K23343
coiled-coil domain-containing protein 22
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139368682
04121 Ubiquitin system [BR:
ocla04121
]
139368682
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
Others
139368682
Protein recycling
CCC complex
139368682
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
139368682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
DUF8567
PUMA_CC
Hemerythrin
DUF508
CoV_NSP7
LYRM2-like
Motif
Other DBs
NCBI-GeneID:
139368682
NCBI-ProteinID:
XP_070963974
LinkDB
All DBs
Position
16:complement(51440434..51448686)
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AA seq
638 aa
AA seq
DB search
MEEVDKILIHSLRQTGTDVGEDVQSVKRFSSELIVEAVVKCLRVIDPALGSSLSHSLPPG
MSARFRVGMSLAQACQDLGYKGEIGYQTFLYSNEPEIRSLLMFLVEKLPRESAEALDQPA
GKSVLLQKLIAAQIKAQLALPWLPPSCRLPLLCKTQNPGPSHSFHSQPLSLLHCLKVPGK
KQLKEEKDYHREFLPPVTAQPSQHASVPASLLELHAGELSAAQEWDNEWNSQGLLSRLTP
EEYRSRKRARLQKRIEEQLRTAAQSHSDTLGAHTGSALTELLQSFGGSSLGGDILAKGTR
FTHTEKFTFTQEPAKASQQMAAAASSLPSSHQSEEELQARQQEELASLQRQLQQLSLSLE
EVGGDMRQLTVSILQVSDELKQKELSKVEKEDSVWVKKQTIDLMPDAENNLAKLQALVEG
SAKRVVNLAAQWEKRRAPLIDEHRRLKELCSNQEMESSRKLSEIKELHNKIHQSAEESKK
KEALYKQLITEFENLPKDVSRSAYTARILEIVGNIRKQKEEITKILSDTKDLQKEINNLT
GKLDRTFAVTDELVFKDAKKDESVRKSYKYLAALHENCTQLIQTIEDTGTIMREIRDLEE
QIETENGKKTVSNLEKILEDYKAIRQENSALAAKIREA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttgataagattttaattcattcccttagacagaccggcacggacgtgggg
gaggatgttcagagtgtgaagcgcttctccagtgagctcatagtggaggcggtagtgaaa
tgtctgcgagtgatcgacccggccctggggagcagcctgtcccactccttaccccccggc
atgtctgcccgctttcgagtgggcatgagcctggcacaggcctgtcaggaccttggctac
aagggagagattggctaccagacttttctttacagcaatgagccagagatccgctccctg
ctcatgttcctggtggagaagctgcccagagaaagtgctgaggccttggaccaaccagca
ggtaaatcggtcctcctccagaaattgatagctgcccagatcaaagctcagctggccttg
ccttggctccctccatcttgcagactacccctcctatgtaaaacacagaacccaggacct
tcccacagtttccactctcagccccttagtttactgcactgcctcaaagtgcctgggaaa
aagcaattgaaagaggaaaaggactaccacagggaatttcttccacctgtgactgcacag
ccgtcgcagcatgcctcagtgccggcctccctgctggagctgcatgcaggggagcttagt
gccgcccaggagtgggacaatgagtggaacagccaaggcctcctttcccgcctcacccct
gaggaatatcgctccaggaagcgtgcccgtctgcagaagcggatcgaagagcagctgcgc
actgcggcccagtctcactcggacaccctcggtgcccacacgggctctgctctcacagag
ctacttcagtccttcgggggctcctcccttggtggtgacatcctcgccaagggcacccgc
ttcactcacaccgagaaattcactttcacacaggagcctgcgaaagcctcccagcagatg
gcagcagcggccagctcccttcccagctcacatcagtcggaggaggaactgcaggcccga
cagcaggaggagctggcctccctgcagcggcagctacagcagctctccctcagcctagag
gaggtgggcggagacatgcggcagctcaccgtatccatacttcaggtgtcggatgagctg
aagcagaaagagctgagcaaggtagagaaggaggactctgtgtgggtgaagaagcagacc
attgacctgatgccggacgcagagaacaacctggccaagctgcaggccctggtggaggga
agtgccaagcgagtggtcaaccttgctgcgcagtgggagaaacgcagagctccgctcatc
gatgagcaccgcaggcttaaggagctctgcagcaaccaagagatggagtcctccagaaag
ctatctgaaatcaaagagcttcacaacaaaatccatcagtctgcggaggagtccaagaag
aaggaggcactgtataaacaactgataacagagtttgagaatctccccaaagatgtctcc
cgctcagcatacactgcgaggatcctggagatcgttggcaatatcaggaaacagaaggaa
gaaattacaaagattctgtctgacactaaggatctgcagaaagagattaacaatctgact
ggaaaactggaccgaacgttcgctgtgactgatgagctggtcttcaaggatgcgaagaaa
gacgaatctgtccgcaaatcctacaagtacctggcagccttgcatgagaactgcactcag
ttgatccaaactattgaggacacaggcacaatcatgagagagatcagagacctggaggag
cagattgaaactgaaaatggtaagaagactgtaagcaacctggagaagatcctcgaggac
tacaaagccattcgccaggagaactctgctctggctgccaagatcagagaggcctga
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