Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368719
Help
Entry
139368719 CDS
T10872
Name
(RefSeq) semaphorin-3ab-like isoform X1
KO
K06840
semaphorin 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_2
V-set
Ig_3
Ig_6
WD40
ig
Motif
Other DBs
NCBI-GeneID:
139368719
NCBI-ProteinID:
XP_070964107
LinkDB
All DBs
Position
16:53024366..53057818
Genome browser
AA seq
765 aa
AA seq
DB search
MWRFVTLVLLAHLGSSLTGAWRASQPRLQFTHSELVQNGRLLSLPLAAGDMHSLLPDEDG
RRLYVAMKDNLLSTSLDDITQNPHMLYWPASPNRVQECLMAGKDRELECANFLRVLQPYN
QTHLYVCGTGAFNPRCAFIPTNVFLQSERQTLSFGETECGKGKCPYDPHQKTATAIIDGE
LYAGISSDFMSRDSAFFRNLGSRHVIRTEQYDSTWLQDAQFVKVASMAETDNPEDDKVYV
FFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARIVCSIPGSDGIQTH
FDQLQDIFILHDGKEKKNPLIYGLFTTSSDVLNGSAVCVYRMQDVIRAFKGNFYHKEGPQ
YKWAEFTGKVPYPRPGTCPSSTYGSYSSTREYPDDVIFFSRTHPLLQEAVLPQGGRPLLV
RVGVHYKFSRLLVDRVEAVDGQYDVLFIGTDSGQVLKSIPLPKEHGVTQEVTLEQLQVFQ
HKSPVTTMTLSKKKQWLFVGSAEGVAQLALFQCELYGQSCTECCLARDPYCTWDGHACSP
FMPIARRRNARQVGDEEDPLTQCVRQGAGLQVKAEQRMMMVAEGNSTYLECMPKSRHAAV
TWYIQAGENSPELHQLQSGKQLVVIERGVLIRQAETGHSGVYHCQLEEHGFRWTAVTIRL
SVWSPSRVLSWSPNNPNPSPDAFQPWYQDVMALIHPSSLEKHCQRLGFRQRRNRNRDQDQ
TKDTNRKTGDGPRGERHKHGGRGGGGGGGGRKSRSKPQQRSPRSA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgattcgtgaccctggtcctcctagcccacctggggagcagtctgacgggggca
tggagagcctcccagcctcgcctgcagttcacccactcagagctggtccagaatggccgt
ctcctgtccctgcccctggcggcgggggacatgcactctctgctgccagacgaagatggc
cgccggctctacgtggccatgaaggacaacctgctgtccacaagcctggacgacatcaca
cagaacccacacatgctctactggccagcaagtccaaaccgggtccaagagtgtttgatg
gctggaaaggaccgagagttggagtgtgctaacttcctgcgggtgctacagccctacaac
cagacccacctatatgtgtgtggaacgggagccttcaaccctcgctgtgccttcatcccc
accaatgtcttcctacagtcggagcgacagactctgtcatttggagagactgaatgtggg
aagggaaagtgtccatacgatccacaccagaaaacagccacagccattattgatggcgag
ctgtacgctgggatctcttccgacttcatgagtcgagactcggcattcttccgcaacctg
ggcagtcgtcatgtgatccgcaccgagcagtacgactccacctggcttcaggatgcccag
tttgtgaaggtggcctcgatggcggagactgataacccagaggatgacaaggtgtacgtg
ttcttcactgagcgggctcaggaggcagagggggctgctgggaaggtgctgtactcccga
gtggcacgtgtctgcaagaatgacatcgggggtcagaggagtctggtgaacaagtggagc
accttccagaaggcacgtatagtctgctccatccctggatccgacgggatacagactcac
tttgatcaactacaggacatctttatcctccatgatgggaaggaaaagaagaaccctctg
atctacggactctttaccacatccagtgacgttctgaatggttcagcggtgtgtgtgtac
cgcatgcaggacgtgataagggccttcaagggaaacttctaccacaaggagggaccgcag
tacaagtgggccgagttcacaggaaaggtcccctatccaagacctggcacatgtcccagc
agtacatacggtagctacagctccacccgggagtaccctgatgacgtcatcttcttcagc
cgtacccaccctctgctgcaggaagcagtgctgccgcagggagggcgccctctgttggtc
agggtgggagtgcactacaaattcagccgactgctcgtggaccgagtagaggcagtggac
ggacagtatgacgtcctgttcattggcacagactcaggccaggtgctgaagtctatcccc
ctccctaaagaacacggtgtcacccaggaggtcaccctggagcagctgcaggtcttccag
cacaagtcacctgtgactaccatgacactgtccaagaaaaagcagtggctgtttgtgggt
tctgcggagggtgtagcccagttggctctgttccagtgtgagctgtacggccagtcctgc
actgaatgctgtctggccagagatccctactgcacctgggacggacacgcctgcagcccc
ttcatgcccattgcacgcaggaggaacgctcgccaggttggtgatgaggaggaccctctg
acacagtgtgtcagacagggagctggtctacaggtgaaagcagagcagaggatgatgatg
gttgccgagggtaacagcacctatctggagtgcatgcccaaatccagacatgcagccgtc
acctggtacatacaggcaggagagaacagccctgagctgcatcagttgcagtcaggaaag
cagctggtggtgattgagagaggtgttctgatccgtcaggccgagacgggtcactctggc
gtgtaccactgtcaactggaggagcatggcttccgttggactgctgtcaccatccgtctg
agtgtgtggagcccctcccgtgtcctctcctggtcccctaacaaccccaacccaagccca
gatgccttccagccttggtaccaggacgtcatggccctcatccatcccagcagcctggag
aagcactgtcagaggctaggcttccgacaacgccggaaccgcaaccgcgaccaggatcag
accaaggacaccaaccggaagacaggggacggccccaggggcgagaggcacaaacatgga
ggccgaggtggaggtggaggaggaggcgggaggaagagcaggagcaaaccccagcagagg
tctccacgaagtgcttag
DBGET
integrated database retrieval system
