Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368728
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Entry
139368728 CDS
T10872
Name
(RefSeq) semaphorin-3G-like
KO
K06840
semaphorin 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
PSI
Ig_3
I-set
Ig_6
Motif
Other DBs
NCBI-GeneID:
139368728
NCBI-ProteinID:
XP_070964122
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Position
16:53523254..53593456
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AA seq
784 aa
AA seq
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MKELSYFCQRMIRFALLLTTVSTTKMNIPRLRLSYKDLVATNRSSIFSGHHGELSLSALF
LDEYHDRLFLGGKDVLYSLRLDHTNLDSKEIYWPPLPGNRDECVQRGKDSQTECANFVRL
LQPYNRTHLLACGTGAFQPMCTYVYVGYRGEHVFTMDPTKMENGRGKVPHDPSLPFASTL
IGGELYTGLTADFLGRDSVIFRSLGGRSTMRTETDQRLLHDPKFVAAHLIPDNDDRDNDK
VYFFFTEKAMEAGNREGAIHTRVGRVCANDAGGQRVLVNKWSTFIKARLVCSVPGPHGID
THFDELEDVFLLRGKDEKNPDVYAIFSTISNVFQGFAVCVYRMADIREAFNGPFAHKEGP
DYQWGAYEGRVPYPRPGVCPSKITNQPGRQFGSTKDFPDAVLQFARGHPLMWRPVYPAMK
QPLLVRANLPYRLKQIVVDRVEAEDGQYDVMFIGTDIGTVLKVIALRSGNTLDTEEVTLE
ELQVFKVPTPITSLEISVKRQALYVGSPVGMAQLRLHRCETYGKACAECCLARDPYCAWD
GTSCTRYTSLSRRRYRRQDIRHGNPALQCMDQNLSVEELDVTEDRVVYGTENNSTFLECV
PRSPQATVTWLLQRDGRKEEVKLDDRVMHMEQGLLFRRVFRQDEGVYVCLSREHGFTQTL
THLSLEVLQGNTLSELLARDDTPLEGPLGVKGYRSWPPCHAYRSTNPLSHLRPWFKDIMQ
LIGPSNLPHVEEYCERLWCNDKLRRKHKSMLDKYRQAQDSARKTRNKGSGERNRTPRDVS
NRQP
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaattatcatatttctgccagcggatgattcggtttgctcttcttctaacaaca
gtctcaactaccaagatgaacataccacgactcagactttcatacaaagaccttgtagcc
accaaccggtcctctatcttcagtggtcaccacggtgagctttccctgagcgctttgttt
ctggacgagtaccatgaccgcctgttcctggggggcaaagacgtcctctactccctgaga
ctggaccataccaacctggactccaaagagatctactggcctccgttgcctggtaacaga
gatgaatgtgtccagagagggaaagattctcagacggagtgtgccaactttgtgcgcctg
ctgcagccctataaccgcacccacctgctggcctgtggtacgggtgcattccaacccatg
tgtacctatgtgtacgtgggctaccgtggagagcatgttttcaccatggaccctaccaaa
atggagaacggacgggggaaggttcctcacgaccccagcctccccttcgctagcacctta
attggtggggagttatacacagggctgactgcagacttcctgggtagagactcagtgatc
ttccgtagtctgggaggtcgctccaccatgaggactgagacggaccagagactgctgcat
gatcctaagtttgttgcggcccacctcatccctgataatgatgaccgtgacaatgacaag
gtgtacttcttcttcacggagaaggccatggaggccgggaacagagagggggccatccac
acccgcgtaggacgtgtgtgtgcgaatgatgcaggtggacagagagtgctggtgaataaa
tggagcaccttcatcaaggccagactggtgtgttctgtacctgggcctcatggcattgac
acacactttgacgagctggaggatgttttcctgcttagaggcaaggatgagaagaaccca
gatgtttatgccatcttcagcaccatcagtaacgtgttccagggctttgcagtttgtgtg
taccgtatggcagacatcagagaagccttcaacgggccttttgcacacaaggagggacct
gactaccagtggggggcttacgagggcagagtgccctatccaagacctggggtgtgcccc
agtaagatcaccaaccagcctggcagacagtttggcagtaccaaggacttcccagatgca
gtgctccagtttgcccgagggcaccccctgatgtggcgaccggtgtacccggccatgaag
cagcctctgctggtcagggccaacttgccctaccgcctcaaacagatcgtggtggaccgt
gtagaggcagaggatggacagtatgacgtcatgttcataggcaccgacataggcactgtt
ctgaaggtcattgcattgcgcagcggcaacactctggacacagaagaggtcactctggag
gagctgcaggtctttaaggtgccaactcccattacctctttggagatctcagtaaaaagg
caagcactgtacgtgggttctccggtgggtatggcccagctgaggcttcacaggtgtgag
acgtatgggaaggcttgtgctgagtgctgcctggccagagacccctactgtgcctgggac
ggcacctcctgcactcgctacacctcgctcagcagacgccgctatcgccgtcaggacatc
aggcatggcaacccggccctgcagtgtatggaccagaacctcagtgtggaagagctggac
gtaacagaagacagggttgtgtacgggacagagaacaacagcaccttcctggagtgtgtc
ccccgctccccccaggccactgttacatggctgctccaacgagacggccgcaaggaagag
gtgaagctggatgaccgagtgatgcatatggagcagggcctgctcttccgccgtgtgttc
cgtcaggatgagggtgtgtatgtgtgtctctcccgtgagcacggcttcacacagaccctc
acccacctctccctggaggtcctgcaggggaacacactgagtgagctgctggcccgtgac
gacacccccctcgaaggtcccctgggggtaaaggggtaccggtcctggccaccctgccat
gcttacaggagcaccaaccccctcagccacctgcgcccctggttcaaggacatcatgcag
ctgatcggcccgtccaacctgccgcacgtggaggagtactgtgagaggttgtggtgcaac
gacaagctgcggcgtaaacacaagagcatgctggacaagtaccggcaggcacaggatagc
gcgcgtaagacccgcaataagggctccggggaacgcaaccggacgccgcgggacgtcagt
aaccgacagccgtag
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