KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368732
Entry
139368732         CDS       T10872                                 
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010  MAPK signaling pathway
ocla04020  Calcium signaling pathway
ocla04218  Cellular senescence
ocla04260  Cardiac muscle contraction
ocla04261  Adrenergic signaling in cardiomyocytes
ocla04270  Vascular smooth muscle contraction
ocla04530  Tight junction
ocla04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    139368732
   04020 Calcium signaling pathway
    139368732
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    139368732
  09144 Cellular community - eukaryotes
   04530 Tight junction
    139368732
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    139368732
  09153 Circulatory system
   04260 Cardiac muscle contraction
    139368732
   04261 Adrenergic signaling in cardiomyocytes
    139368732
   04270 Vascular smooth muscle contraction
    139368732
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ocla04040]
    139368732
Ion channels [BR:ocla04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   139368732
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH CAC1F_C PKD_channel
Other DBs
NCBI-GeneID: 139368732
NCBI-ProteinID: XP_070964129
LinkDB
Position
16:complement(53860648..53979888)
AA seq 2151 aa
MAFAVGVRRHRGAQYASSTRAPPPGDTPALWSENPSQSESCPQTGTISWQAEIHAARNSQ
GDVSQSMSARNSVPGATPAPVGSLSQRKRQQYAKSKKQGGSTNSRPPRALFCLTLNNPIR
RACISLVEWKPFDIFILLSIFANCVALAVYIPFPEDDSNSTNHDLETVEYAFLIIFTIET
FLKIIAYGLVMHQNSYVRNGWNMLDFVIVIVGLFSVVLEVITKEGDAGAQGGKPGGFDVK
ALRAFRVLRPLRLVSGVPSLQVVLNAIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKM
HATCYLVGTGILAEEEPVPCAVSGHGRQCMMNGTVCREGWHGPNGGITNFDNFLFAMLTV
FQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAK
ARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENDEEGDEEGGKRIPSKPASETESVNT
DNPNGEDEKANCCGPLCQKIIKSKYSRRWRRWNRFCRRKCRVAVKSVSFYWLVIILVFLN
TLTISSEHYNQPDWLTEVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVC
GGIVETILVELAIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLL
LFLFIIIFSLLGMQLFGGKFNFDETITKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIM
AYGGPFSSGMVVCIYFIILFVCGNYILLNVFLAIAVDNLADAESLNTAQKEEEEEKERKK
SARDDTDKMEELKPEDQDGDLKVPLEEEEEKEPYPTPDTPVGDDANDDDNLPEVPVGPRP
QRLSDLSIKEKTPPIPEGSAFFIFSHTNPVRVACHKLINHHIFTNLILVFIMLSSVSLAA
EDPIRNFSARNIILGYFDYAFTAIFTVEILLKMTAFGAFLHKGAFCRNYFNLLDLLVVGV
SLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLL
QFMFACIGVQLFKGKFYRCTDEAKSSPEECKGTYILYKDGDTALPAVRERIWYNSDFTFD
NVLMAMMALFTVSTFEGWPALLYKAIDSNRENMGPIYNYRVEISIFFIIYIIIIAFFMMN
IFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNST
GFEYVMFVLIILNTLCLAIQHYGQSHLFNYAMDILNMVFTGVFTVEMIFKLIAFKPRHYF
ADAWNTFDALIVVGSVVDIAITEINAIPVVKVIVDPGNTEDSARISITFFRLFRVMRLVK
LLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIALVDHTQINRNNN
FQTFPQAVLMLFRCATGEAWQEIMLACLPGKLCDSESDYNPGEEKTCGSGFAIIYFISFY
MLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTL
LRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQ
ANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLV
GRHSFSSLNSTIALQAGLRTLHDIGPEIRRVISCDLQDEGLVDMNAEEDDEVSRRNGVLF
ANHTNHVNGDHRGSVTQRPLQVPPPSCHAFVEPSQVGSEEGAGDPHPYNHYYPKSPMSSN
ANLNNANIPTLPSLPKEGQRCCLRREHSSANGAPSSSSHRKSVDFDTLTTVQSARRLYYE
TYIRSESGGVLYPTIRREKPGGADSDDDKGSGEYFSGEEYQEDDLMLHKDRMPHREFQDL
QTDLDTNASRGYHQPDSLYDDDQQPIYQDGGRSPKRRLFPSTPQAPHRPSFNFECLRRHS
SQDDDIPLTTSIPHRTALPLHLMQQQVMAVAGLDSSRVQRLSPSRSLRSWATPPTSPISR
DHSPYYTPLIQVDWRGPGSVSSTPGSVRRSSWYTDAPEAPLSLTYSPSQLQIPPEYRRQY
HQKIGSANSLVEAVLISEGLGKYAKDPKFVAATKHEIADACEMTIDEMESAASNLLNGSM
GNGAGATGATDKVTATSLRDRNLHDYSDEEPDTTVKCEEDLTDEMICISTL
NT seq 6456 nt   +upstreamnt  +downstreamnt
atggcgttcgctgtcggggttcgaagacaccggggggcacaatatgccagcagcaccaga
gcccctccccctggtgatacgccggccctctggtcagaaaacccctcccagtccgagtcc
tgcccccagaccggcactatctcctggcaggccgagatccatgctgctcgtaactcccag
ggcgacgtctcccagagcatgagcgcccgcaactctgtccctggggccacgcctgcaccg
gtcggctcgttgtcacagaggaagaggcaacagtacgccaagagcaagaagcagggcggc
tccaccaacagcaggccgcccagggccctgttctgcctcactctgaacaatcccatccgc
agagcctgcatcagcctcgtggagtggaaaccctttgatatctttatactgctctctatt
tttgccaactgtgtggccttagctgtttacatccccttccctgaggacgactccaactcc
accaaccacgacctggaaacagtagaatatgccttcctgatcatctttacgatagagacc
tttctgaagatcatagcgtatggtttagtcatgcatcagaactcctacgtaaggaatggc
tggaacatgctagattttgtcattgtcatagtagggttgttcagtgtagttctggaggtg
ataaccaaagagggtgatgcgggggctcaggggggtaaaccaggaggctttgacgtcaag
gccctccgagcattccgtgtgctccgccccctccgtcttgtctcaggagtacccagttta
caggtagtgttgaacgccatcattaaagccatggttcctctgctccacatcgctctgcta
gtcctcttcgtcatcatcatctatgccatcatcggcttggaactcttcatcggcaagatg
cacgccacttgctacctggtgggcaccggcattctggcagaggaggagcctgttccgtgt
gcagtgtcaggccatgggcgccagtgcatgatgaatgggactgtgtgtagagagggatgg
catggccccaacggtggcatcaccaactttgacaacttcctgtttgccatgcttactgtt
ttccagtgtatcaccatggagggctggactgatgttctctactggatgaatgatgccatg
ggctttgagttgccctgggtttacttcgtcagtctggtcatcttcggctccttcttcgtt
ctcaacctggttctgggagttttaagcggagagttttccaaggagagagagaaggccaag
gctcgtggagacttccagaagctgagagagaagcagcagctggaggaggatctgaagggc
tacctggactggatcactcaggccgaggacatcgaccctgagaatgacgaggagggggac
gaggaggggggaaaacgcatcccaagcaagcccgccagcgagacagagtctgtgaacact
gacaaccccaacggagaggacgaaaaggctaactgctgtggaccactctgtcagaaaatt
atcaaatcaaagtacagtcggcgatggcgtcgctggaaccggttctgccgcaggaagtgt
cgtgttgccgtgaagtcagtgtctttctattggctggtgatcatcctggtgtttctcaac
acactcaccatctcctcagagcactacaaccagcctgactggctcacggaagtacaggat
gtggccaacaaggttctgctggctctgtttacgtgtgagatgctggtgaagatgtatagt
ctgggcctgcaggcctacttcgtgtctctgttcaaccgcttcgactgcttcgtggtgtgt
ggcggcatcgtggagaccatcctggtggagctggccatcatgtctcccctgggcatctct
gtgttccgctgtgtccgtctgctacgcatcttcaaggtcacacgccactgggcatctctc
agcaacctggtagcatcgctgctcaactccatgaagtccatcgcctccctcctgctcctg
ctcttcctcttcatcatcatcttctctctgttgggcatgcagctcttcggcggcaagttc
aacttcgacgagacgataactaagaggagcaccttcgacaacttcccccaggcactactc
acagtgtttcagatcctgacaggcgaggattggaatgctgtgatgtatgacggcatcatg
gcgtacggtggacccttctcctcaggcatggtcgtctgcatctacttcatcatcctcttt
gtctgtggaaactacatcctgctgaacgtcttcttggccatcgccgttgacaacctggca
gatgcagagagcctgaacacagcccaaaaggaggaagaggaggagaaggagaggaagaag
agtgccagagatgacactgataagatggaggagctgaaacctgaggaccaggatggggat
ctcaaggttccactggaggaggaagaggagaaggagccgtatcccactccagacactcca
gttggtgatgatgccaatgatgatgataatctgccagaggttccggttgggccacgccct
caaaggctgtcagacctcagcatcaaggagaagactccgcccatccctgagggcagtgct
ttcttcatcttcagccacactaacccagtccgggtggcctgccacaagctgatcaaccac
cacatcttcaccaacctcatcctggtcttcatcatgctgagctctgtgtctctggctgct
gaggaccccatacggaacttctctgcacgcaacatcatacttggttattttgactatgct
ttcacggcaatctttactgttgagatcctattgaagatgacagcttttggggctttcctc
cataaaggagccttctgcaggaactacttcaacctgctggacctactggtggttggagtc
tctctggtgtcctttggcattcagtcatctgccatctctgtggtgaagatcttgcgtgtg
ttgagggtgttgcggcccctgagggccatcaacagagccaagggcctcaagcatgtggtc
cagtgtgtatttgtggccatcaggaccattggcaacatcatgatcgtcaccacgctgcta
cagttcatgttcgcctgcataggagtgcagctattcaagggcaagttctatcgctgcaca
gacgaggccaagtccagcccggaggaatgcaaaggcacatacatcctgtataaggatgga
gatacagcgttgcctgcagttagggagaggatctggtacaacagtgacttcacctttgac
aacgtcctcatggccatgatggctctgttcaccgtctctacatttgaaggctggcctgct
ctgctgtacaaggccatcgactccaaccgagagaatatgggtcccatctacaactaccgc
gtggagatctccatcttcttcatcatctacatcatcatcatcgccttcttcatgatgaac
atctttgtcggtttcgtcatcgtcaccttccaggagcagggagagaaagagtacaagaac
tgtgagctggacaagaaccagcgtcagtgtgtggagtatgctctgaaggctcgtccactg
agaaggtacatccctaagaacccctaccagtataagttctggtatgtggtcaactccaca
ggctttgagtacgtcatgttcgtcctcatcatcctcaacacactgtgtctggccatccag
cactacggccagtctcacctgttcaactatgccatggacatcctcaacatggttttcact
ggcgtcttcactgtggagatgatctttaaactcatcgccttcaaacccaggcactatttc
gccgatgcatggaacacatttgatgccttaattgttgttggtagcgtcgttgacattgca
atcacagagatcaatgccatcccagtggtgaaggtgattgtggacccagggaacaccgag
gacagcgctcgcatctccatcacattcttccgtctgtttcgagtcatgcgattggtcaag
ctgctcagcagaggggagggcatccgaacgctcctgtggaccttcattaagtccttccag
gctcttccctatgttgcccttctgatagccatgttattcttcatctatgctgttattgga
atgcaggtgtttggaaagattgccttggtagaccacacacagattaaccgaaacaacaac
ttccagacctttcctcaagctgtcctgatgctcttcaggtgtgctacaggtgaggcgtgg
caggagatcatgctggcatgtctgccagggaagctgtgtgactcggagtcagactacaac
cctggagaggagaaaacctgtggcagcggattcgccattatctacttcatcagcttctac
atgctctgcgccttcctgatcatcaacttgtttgttgctgtcatcatggataactttgac
tatctgacgcgtgattggtccattctgggccctcaccacctggatgagtttaaaaggatc
tggtctgagtacgaccctgaggccaagggcaggataaagcatctggatgtggtgaccttg
ctgagacgtatccagccccctctaggcttcggcaagctgtgtccacacagagtggcctgc
aagagactggttgcaatgaacatgcccctgaacagtgatggcacggtcatgttcaatgcc
actctgtttgccttggtgaggaccgctctgaagatcaaaactgaaggcaacttggaacag
gccaatgaggagttgcgagcggtcatcaagaagatctggaagaggaccagcatgaagctg
ctggaccaagtggtgccccctgcaggcgatgacgaggtaaccgtggggaagttctatgct
accttcctgatacaggactacttcaggaaattcaagaaacgcaaagagcaaggcctggtg
ggaagacactcattctccagcctgaactccaccatcgccctccaggctggcctccgcaca
ctgcatgatattgggcccgaaattcgccgagtcatatcatgtgacctgcaagacgagggc
cttgtagacatgaatgcagaagaagatgacgaggtgtctaggaggaacggcgtgctgttc
gccaaccacaccaatcacgttaacggggaccaccggggttctgtcacccagcggcccctc
caggtcccgcctccttcctgccacgcattcgtggagccctctcaggttggctctgaggaa
ggggctggtgacccccacccctacaaccactactaccccaaatcccccatgtcctccaac
gccaacctcaacaacgccaacatccccaccctgccctccctgcccaaagaggggcagcgg
tgctgtctccgccgcgagcactcgtccgctaatggggcaccctcctccagctcgcaccgc
aagagtgttgacttcgacaccctcaccacggtccagtctgcaaggaggctctactatgag
acctacattaggtcagaatcagggggtgttctgtacccaaccatccgtagagagaagcca
gggggagcggacagtgatgatgacaagggctcaggggaatacttcagtggagaggagtac
caggaggacgacctcatgttgcacaaggacaggatgccccatagggagtttcaagacctt
caaactgacttggacacaaatgcatcgaggggttaccatcaaccggatagtctctatgac
gacgaccaacaacccatttaccaagatggtgggcggtcgccaaagcgacggttgttcccc
tccacaccccaggcaccccacagaccctccttcaactttgagtgtctgcggagacatagc
agtcaggatgatgacatccccttgaccacttccattccccatcgaacagctctacccctg
catctgatgcagcaacaggtgatggcagtggctggcctggactccagcagagtccagcgt
ctctctccatcacgctctctacgttcctgggccacaccccccacctcccccattagcagg
gaccactccccatactacacccccctcatccaggtggactggcgtggtcccggcagtgtg
agcagcacccccggctctgtgagaagaagctcctggtacactgacgccccggaagcccct
ttgagcctcacctactccccctctcagctccagatccccccagagtaccgcaggcagtac
caccagaagataggcagtgccaacagcctagtagaggccgtgttgatttcagaaggactg
gggaaatacgccaaggaccccaaatttgtggcggcgacaaagcatgagatcgcggacgcc
tgcgagatgaccatcgatgagatggagagtgccgccagcaacctgctgaatggcagtatg
ggtaatggagcgggggcaaccggggccacggacaaagtgacggccacgagcctcagggac
cgtaatctccatgactacagtgatgaggagccggacacgactgtgaaatgtgaagaagat
ctgactgatgagatgatatgcatcagcaccctatag

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