Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368779
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Entry
139368779 CDS
T10872
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139368779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139368779
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139368779
GBAF(ncBAF) complex
139368779
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Secretin
Motif
Other DBs
NCBI-GeneID:
139368779
NCBI-ProteinID:
XP_070964210
LinkDB
All DBs
Position
16:56372978..56394788
Genome browser
AA seq
380 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQNKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNMGSMGPGGMGQNGGSGPIHSQSNLNDAMTPGLPPPSMM
QSQMSNVSMMQQPHYPSSQTGAGQQHYQGQQTAMGMLGQSGQGNSMVSQRPMGTYRPRQQ
GCALQYMGQDEFYGEQYGHTQSSSEPINQQYYPDGHGEYSYQQSSYGEQGYERPFDESSQ
HYYEGGNSQYSQQQAQYQHGSGQQQPFSQQQYPSQQGYSTQQQGYGPGQGASSHYSQYQQ
GQGQQYSSYRSSQAAPGAQTQRPYAYEQVQLQLPLTPRFEEDGAVQPNIGVNMETTSNKA
PPPGQTSGQVRQGNSSVNAP
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcattttcatcggcgcgcccaaggagcaaaggggaggtgacacaacaaact
atacaaaagatgctggatgaaaatcaccatctgatacaatgtataatggattaccagaac
aaaggaaaaacagcagaatgcacacagtatcagcagattcttcacagaaacctggtctat
ctggccacgatagcagattctaatcagaacatgcagtcactgttacctgcgcctcctacc
cctaacatggggagtatgggtcctggagggatggggcagaacgggggcagtgggcccata
cactcccagagtaacctcaacgacgccatgacacctggcctgccccccccctccatgatg
cagagtcagatgagcaatgtctccatgatgcagcagcctcattacccgtcgtcccagact
ggggccgggcagcagcactaccagggccaacagactgctatgggcatgttggggcagagc
ggacaaggcaacagtatggtgagccagaggcccatggggacttaccgacccagacagcaa
ggatgtgcactgcagtacatgggacaagacgagttctacggagagcagtatggacacact
cagagctccagtgagcccataaaccagcagtattaccctgatggtcatggcgagtactcc
taccaacagtcgtcctatggcgaacagggctatgagaggccctttgacgagtcctcacag
cactactatgaaggaggcaactcccagtacagtcagcagcaagcccagtaccagcatggc
tcaggtcagcagcagcccttcagccaacaacagtacccctcacagcagggctacagcaca
cagcaacagggctatggtccaggtcagggtgcgtcgtcccattactcccagtaccagcag
ggtcagggccagcagtatagctcctaccgctcttcccaggctgcccctggggcacagaca
cagaggccctacgcttacgaacaggtacagctacagctacccctgaccccacgttttgag
gaggacggtgctgtccaaccaaacattggggtcaatatggaaactaccagcaataaggca
ccacctcctgggcaaactagtggacaggttaggcaagggaacagttctgtgaatgcccct
taa
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