Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368785
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Entry
139368785 CDS
T10872
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139368785
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
139368785
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Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
139368785
NCBI-ProteinID:
XP_070964224
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Position
16:complement(56588838..56595605)
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AA seq
417 aa
AA seq
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MVELVKKMRLREWLIAQIDSGKYAGLTWENEDKTMFRIPWKHAAKQDYSLNEDAALFKAW
AVYKGKYREGRDKADPTTWKTRLRCAFNKSTDFKEVPERSQLDVSEPYKVYHIQAEPETG
RDSESPQPESQVIIQTSRSSVPLRNIVTHHPQFGCNSESEARDGRVNSREGLAGDHMYYW
SNTGNPQRDGSAPLSIVVPTPQISDLRVRVCLFYQGQLVVDVTTSTPDGCFLLQGQVPLG
NERIYGPCTAQQVPFPPPGVIHLPPGIAEAMGRLLPHLERGVLVWVAPDGVFIKRFCQGR
VYWSGPLAQHTDRPNKLDRERTCKLLDTAIFLKELQDYIQGAGPKPRYEIDLCFGEEFPD
ASQLKTRKLIIAQVVPLFAVNLLHRCLRMGTEGRPRLHTHKTMGEEGEGQPHPLPQR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggtggagctggtcaagaaaatgcgtttgagagagtggctgatagcgcagatagacagc
ggaaagtatgcaggacttacctgggagaacgaagacaaaactatgttcaggatcccatgg
aaacacgcggcaaaacaggactatagtctgaacgaagatgcagcactattcaaggcgtgg
gcagtgtataaggggaagtatcgggaggggagggacaaggcagatcccaccacctggaag
actcgtctccgctgtgccttcaacaagagcacagacttcaaagaagtcccagagcgcagc
cagttagatgtatccgagccctacaaggtctaccacatccaggcagagccagagacaggc
agagactcagaatctcctcagcctgagagtcaggtgatcatccagaccagccgctccagt
gttccactgaggaacattgtcacacaccatccacagtttggctgcaatagtgaatcagag
gccagggatggaagagtcaactccagagagggcttggcaggggaccatatgtactactgg
tccaacacagggaatcctcagagggatggctctgctcctctctccatagtcgtccctaca
ccacagatctctgacttgcgtgtgcgggtgtgtctgttctatcagggccagctagtagtg
gatgtgaccaccagcaccccagacggctgtttcctcctgcagggtcaagtgcccctgggg
aatgagaggatctatggaccctgcacagcccaacaggtccccttcccccctccaggggtc
atccatcttcccccgggcatcgctgaggccatgggccgcctgctgccccacctggagagg
ggcgtcctggtgtgggttgctccagacggggtgtttatcaagaggttctgccagggcagg
gtgtactggagtggccccctggcccaacacacagacaggcccaacaaactggacagggag
aggacctgcaagctgctggacacagctatatttctgaaggagctccaggactatatccag
ggggcgggacccaaacctcgctatgagattgacctctgctttggtgaggagtttcctgac
gccagccaactgaaaaccaggaaactgatcattgcacaggtggtgcccctgtttgctgtc
aacctactgcataggtgcctgaggatggggacagaggggagaccgcgccttcacacacac
aagaccatgggggaagagggagagggtcagccacaccccctgccccagcggtaa
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