Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368793
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Entry
139368793 CDS
T10872
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
ocla
Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03320
PPAR signaling pathway
ocla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139368793
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
139368793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139368793
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139368793
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139368793
Nuclear receptors [BR:
ocla03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
139368793
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PPARgamma_N
Motif
Other DBs
NCBI-GeneID:
139368793
NCBI-ProteinID:
XP_070964240
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All DBs
Position
16:56864783..56879315
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AA seq
594 aa
AA seq
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MTFELGTLDLAEMDNRMNSSDMKTLSTLDHLYLSSLEHSLNSPHHHSPDINHSFNHSSDI
NNSFNHSSDINHSFNHSPHRNHSFNHSPDINHSFNHSSDINNSFNHSPDTNHSFNHSSDI
NHSFNHSPHRNHSFNHSPHRNHSFNHSPDRNHSSNHSPHRNHSFNYPYNYTYSEYQCSLK
EESMSPLWSSNCSVVSLSRPTLHSKSPTYTDPSTLLYIDCRVCGDTASGFHYGVHACEGC
KGFFRRTMRLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLLVGMSQDAIRFGRMPQEERE
KLLAEFMDVSPRSPESVDLRALSRQLCLSYHRHFPLTKSRARAILSGKTHGNSPFVIHDM
KSLTAGQDFINSRQFPFLEHQRSVLPPQEPAGELELFFFRQVQFRTAEAVREIIEFAKSI
PGLTELDINDQVTLLKYGVIEVMLIMLAPLMNKDGTLFAYGQIFMTREFLKSLRKPFCEM
MEPKFEFAVKFNVLELDDSDTALFLAVIILSGDRPGLVNVKPIEDLQEAVLQALELQLKT
IHPDCPQLFARLLQKMTDLRPLVADHIRLIHLLKKQELEMCLHPLLQEIMRDLY
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgagctgggcacattggacctggcagagatggacaacaggatgaatagttct
gacatgaagaccctgtcaaccctggaccacctttacctctcctccctagagcacagcctc
aacagtccccaccaccacagcccagacataaaccactcattcaaccacagctcagacata
aacaactcattcaaccacagctcagacataaaccactcattcaaccacagcccacacaga
aaccactcatttaaccacagcccagacataaaccactcattcaaccacagctcagacata
aacaactcattcaaccacagcccagacacaaaccactcattcaaccacagttccgacata
aaccactcatttaaccacagcccacacagaaaccactcattcaaccacagcccacacaga
aaccactcattcaaccacagcccagacagaaatcactcatccaaccacagcccacacaga
aaccactcattcaactacccatacaactacacatacagtgagtaccaatgttcgttaaaa
gaggagtccatgtcccctctttggtctagcaactgtagcgttgtcagcctgtccagaccc
actcttcactccaagtcccccacttacacagaccccagcactctgctctacattgactgc
agagtgtgtggggacacggcctcaggcttccactatggagtccatgcctgtgagggctgc
aagggattcttccgaagaaccatgaggttaaaactggtgtatgaccactgtgatctgcat
tgtcggattcacaaaaagagccggaataaatgccagtactgtcgctttcagaaatgtctg
cttgtgggcatgtcacaagatgccatccgcttcggccggatgccccaggaggagagagag
aagctgctggctgagtttatggatgtgtcccccaggagcccagagtcagtggacttgaga
gccttgtccagacagctgtgtctgtcctatcacagacacttccccctgaccaagagcagg
gccagagccatcctgtctgggaagacccacggaaactcaccatttgtcatccatgacatg
aagtccctgacagcgggtcaggactttataaacagtagacagttccctttcctggagcac
cagaggtctgtcctgccccctcaagagcctgccggggagctggagctcttctttttccgg
caggttcagttccgcaccgccgaagctgtacgagaaatcatagagtttgccaagagtatc
cctggattgacagagctggacataaatgaccaggtgaccctgctgaagtacggggtcatc
gaggtcatgttgatcatgctggcgccgctgatgaacaaggatggcacactgttcgcctac
ggacagatcttcatgacccgggagttcctcaagagtctgaggaagcccttctgtgagatg
atggagccaaagtttgagtttgcggtaaaattcaacgtgctggagctggacgatagtgat
acggcgctcttcctcgctgtcatcatcctcagtggagaccgtccaggcctggtgaatgtg
aagcccatcgaggacctccaggaggcagtactgcaggccttggagctgcagttgaagacc
atccacccagactgcccccagctgtttgccaggctgctgcagaagatgaccgacctgcgg
ccgctggtggctgaccacatccggctcatccacctgctcaagaagcaggagctggagatg
tgtctgcaccccctactacaggaaatcatgagggacctgtactag
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