Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368825
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Entry
139368825 CDS
T10872
Name
(RefSeq) glutamine--tRNA ligase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139368825
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139368825
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139368825
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
139368825
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class I (A)
139368825
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139368825
Prokaryotic type
Other AARSs
139368825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA_synt_1c_R2
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-GeneID:
139368825
NCBI-ProteinID:
XP_070964322
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Position
16:58438191..58444693
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AA seq
773 aa
AA seq
DB search
MADPLTLFTSIGLSEQKAKETLKNDALCSSLKDAIAQAQRVLGAAGVDKATGTLLYTMTS
RLRDPKRLGFLTDHIAQRKICTELQLAAALEFVKSHPQDPINQQEFESLCGVGVVITPEQ
IEDKVEKVIKKHKDQLLQERYRFNMGLLMGEARGGLMWADGKMIKNEVDMQVLHLLGPKT
EADLEKKPKAQKAKAPDGEVKEELTMNGELKIEGRSLMDELRGVALNFHKPGENYKTEGY
VVTPKTMDLLKQHLEFTGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANDGICYLRYD
DTNPEKEEEKYFTAIKDMVEWLGYKPYEITHASDNFQRLYDLAVDLIRRGHAYVCHQRGE
ELKGHNPPPSPWRERPAEESLVLFDRMRRGLFAEGEATVRMKIVMEDGKMDPVAYRIKYT
AHHRTGDAWCIYPTYDYTHCLCDSIENITHSLCTKEFQARRSSYFWLCNALDVYCPVQWE
YGRLNLTYTVVSKRKIIKLVEEGTVRDWDDPRLFTLTALRRRGFPSEAINNFCAKVGVTV
AQATMEPHMLESCVRDVLNDHAPRAMAVLEPLKVTITNLPEGIRNDVRVPDFPANEFMGS
HVVPFTRTIFIEQSDFREMMEKGYKRLTPDQPVGLRHAGYVISVQKVIKDAQGRVVELDV
HCCSSNEAAEKPKAFIHWVSEPQKCEIRLYERLFLHKNPEDPSEVPGGFLSDINPNSLQV
IDSALVDISVSKAKVFDKFQFERVGYFALDPDSTADKLVFNRTVTLKEDPGKM
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgttgacactattcacttctatcgggctaagtgagcagaaagctaaggag
actttgaaaaatgatgccttatgttcttccctaaaggatgctattgcacaggcccagcgg
gtgcttggggcggcaggagtggacaaagcgacagggaccctcctgtacacaatgacctct
cgtcttcgagaccccaaacgcctgggcttcctcacagatcacatcgctcaacgcaagatc
tgtacagagctgcaactggcagctgctttggagtttgtgaagagccatccccaggaccct
atcaaccagcaggagtttgagtctttgtgtggagtgggagtggtcataacaccagagcag
atagaagacaaggtggaaaaagtgatcaagaagcacaaagaccagctgctgcaggagagg
taccgttttaacatgggactgctcatgggggaggctcgtggtggcctgatgtgggctgat
gggaagatgatcaaaaacgaggtggacatgcaggtcctccatctccttggcccaaagaca
gaggctgacctggagaagaaacccaaggctcagaaggctaaggctccagatggtgaggtg
aaggaggagctcacaatgaatggggagttaaagattgagggcagatcgctgatggatgag
ctgagaggagtggccttgaatttccacaaaccaggagagaactataaaacagagggctat
gtggtcactcctaaaaccatggacctgttgaagcagcatctggagttcactggaggacag
attcgaactcgtttccctccagagcccaacggtattcttcacattggtcacgccaaagcc
atcaactttaattttggctacgctaaggctaacgatgggatctgctacttgaggtatgat
gacactaacccagaaaaggaagaggagaagtacttcactgccatcaaagacatggtggag
tggctgggttataagccttatgaaatcactcacgcctccgacaacttccagagactttac
gacctggcagtggacctcatccgtaggggccatgcctacgtgtgtcaccagcggggggag
gagctgaagggtcacaacccgcccccgtcgccatggcgagagcgtcctgctgaggagtca
ttggtgctgtttgacaggatgaggcggggcctgttcgctgagggagaggccacagtcagg
atgaagatagtgatggaggacggcaagatggaccccgtggcctacaggatcaaatacaca
gcccaccatcgcactggggacgcatggtgtatctatcctacctatgactacacccactgt
ctgtgtgactccattgaaaacatcacccactcactctgcaccaaggagttccaggccagg
cggtcatcgtatttctggctgtgtaatgctctggacgtgtactgccctgtgcagtgggaa
tatggccgtctgaacctcacctacaccgtggtctccaagaggaagatcatcaaactggtg
gaggaaggaactgtcagggactgggacgaccctcgtctcttcactctaactgctctgagg
aggaggggcttcccatctgaggccatcaacaacttctgtgcgaaggttggagtgactgtt
gcccaggcaacgatggagccccacatgttagagtcgtgtgtgagggatgtgctgaatgac
cacgccccccgagccatggccgtcctggagcccctcaaagtcaccatcaccaacctgcct
gagggcatacggaatgatgtccgtgtgcctgacttcccagccaatgagttcatgggcagc
catgttgttccatttacacgcaccatcttcatcgagcagagcgactttagagagatgatg
gagaagggctacaagcgtctgaccccagatcagccagtaggcctgaggcatgctggctat
gtcatatctgtacagaaggtcatcaaggatgcccagggcagggtggtggagttggatgtg
cattgctgtagttccaatgaggctgcagagaaacctaaggccttcatccactgggtcagc
gagccccagaagtgtgaaatccgtctatacgaaagactattccttcacaaaaatcctgag
gacccgtctgaggtgcccggcggcttcctaagtgacatcaaccctaactccctgcaagtg
attgacagtgccttggtggacatctctgtgagcaaggcaaaagtgtttgataagttccag
tttgagagagtgggctacttcgcactggacccagacagcacagcagacaagctcgtcttc
aacagaacggtcaccctcaaagaggatcccgggaagatgtga
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