Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368826
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Entry
139368826 CDS
T10872
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03410
Base excision repair
Brite
Enzymes [BR:
ocla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
139368826
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
139368826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139368826
NCBI-ProteinID:
XP_070964323
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Position
16:complement(58429155..58438034)
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AA seq
384 aa
AA seq
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MSQHALLSAGTKSWRSLACSRSELRLDLTLGCGQSFRWRETGDGHWTGVMGGRVWTLTQT
DDTLWYHTYNSPNTIGGDGRKRRAGSLLQGSKGSGKRSKGVIEVKEEEEGEPVAVTPDRK
EEELLNDYFQLKVKLGDLYRDWGAADPHFNSIAKIFTGVRMLRQDPTECLFSFICTSNNH
ISRIQGMVERLCQSLGTPLCQLDQTSYHDFPSLHALADNSVEACLRDLGFGYRARFLQQS
ARQILDSHGGPHWLQGLRSAPYLQARDALRTLPGVGPKVADCVCLMSLEKACVVPVDTHV
WQIAKRDYSCAAGNGQKSLTDKVHRQIGDFFRQLWGPYAGWAHSVLFCSDLKKFQKLKET
HSLKQEEEEKVKIKAEGEGINKTI
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcatgcattgctgtcggcggggaccaagtcatggcgctccctggcctgctca
cgatcagagctccgtttggacctcacactaggctgcggacagagcttccgctggcgagag
acaggagatggccactggaccggagtgatggggggacgagtgtggactctcacccagaca
gacgacacactatggtaccacacatacaatagccccaacaccataggaggggatgggagg
aagcggagggcaggttccttgctccaggggtcaaaggggtcagggaaaagatccaaggga
gtgatagaggtgaaggaggaagaagagggggagccagtggctgtgaccccagacaggaag
gaggaagagctgctgaatgattatttccagctgaaggtgaagctgggggatctgtacaga
gattggggagcagccgacccacactttaacagcattgccaagatcttcacaggtgtgcgt
atgctgcgtcaggaccccacagagtgcctgttctccttcatctgcacctctaacaaccac
atctctcgtatccagggcatggtggagaggctgtgccagtccttgggcacccctctgtgt
cagctggaccagaccagctaccacgacttcccctccctgcatgcactcgcagacaacagt
gtggaggcttgtctgagggacctggggtttggatacagggccaggttcctgcagcagagt
gcaagacagatcctggactctcacggtgggccccattggctccaggggctccgcagtgcc
ccctacctgcaggcacgtgacgcactgcgcaccctgcccggggtaggccccaaggtggca
gactgtgtgtgtctgatgtctctggaaaaggcctgtgttgtgcctgtggatacacacgtg
tggcaaatcgcaaaacgagactacagttgtgcggcgggcaacgggcagaagagcctcaca
gacaaggtccaccgtcaaataggggacttcttcaggcagctgtggggtccttatgctggt
tgggcacactcggtgttgttctgttccgacctgaagaagttccagaagctgaaagaaaca
cactctctgaaacaggaggaggaggagaaggtcaagataaaggcagagggagagggaata
aacaagacaatttaa
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