Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368875
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Entry
139368875 CDS
T10872
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139368875
Spliceosome [BR:
ocla03041
]
Complex C
Other components
Complex C specific factors
139368875
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Other DBs
NCBI-GeneID:
139368875
NCBI-ProteinID:
XP_070964422
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Position
16:complement(62480900..62497043)
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AA seq
706 aa
AA seq
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MCDVEAKMAAPLSTMKFWKPGSEAPGISEERHVTTETTGSPIIFNPHTALSIEKQRQKLP
VFKHRNNILYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAIS
VANRLAEERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLML
DEAHERTLYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFQEFFNLNETGDPNKDTCGI
LTVEGRTFPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQ
EQARALGRLGMKKYLKVLPMYAGLPYTDQMKVFERTPPTVRKVVVATNIAETSITINGVV
FVIDCAFVKLRAYNPCTAIESLVVTPISKASASQRAGRGGRNRAGKCFRLYTEEDFEKLP
ASTVPEMQRTNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGLDQYGRL
TDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFMVPANQKKPAAREH
RKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLQRAMTVREQLRRLMNKFKVP
RTSSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELHIHPNSVLFGEKPTKWVVF
NEVVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHGSLTSKRSRVL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgtagaggccaagatggcggcccccctctccacgatgaaattttggaaaccg
ggttcggaggcccccgggatatcggaggagcggcatgtcacgacagaaacgacaggctcc
cccatcattttcaaccctcacaccgcgctgtccatcgagaagcagcgacagaaacttcct
gttttcaagcacagaaacaacatcctctacttggtggagagttaccagacagtgatcatc
gtaggagagacaggatgtgggaagactacacagatcccccagtatttgctggaggctggc
tgggcagctgaggggaaggtgattggtgtgacacagcctcgtagagtggctgctatctca
gtagccaatcgtttggcagaagagcgtggagccctgttggggcatgaggtgggctatacc
attcgctttgatgactgctctgacccccatgccacccgcattaagttcctgacagatggg
atgctggtgagagagatgatggctgatcctctactgaagaagtacagtgtcctaatgctc
gacgaggcccatgaaagaaccctttacacggacatagccatcggcctgctaaagaagatt
cagaagaagcgccgagacctccggctgatagtggcctctgccactctggatgccaagaaa
ttccaagagttctttaacctgaatgagactggagatcctaacaaggacacgtgtggaatt
ctgacggtggagggacgcaccttccccgttgacgtcttctacactgtcagcccagtccca
gactatgtgaaggccacagtggagacggtgctgaagatccatgagactgaggatgatgga
gatgttctggccttcctcactggacaggaggaagtagagaaggtggtgtctctgctccag
gagcaggccagggctctgggccgtctcggcatgaagaaatacctcaaggtgctgcccatg
tacgcaggcctgccctacactgaccagatgaaggtgtttgagaggacgccccctactgtc
cgcaaggtggtggtggccactaacatagcagagacgtccatcaccatcaacggcgtcgtg
tttgtgatcgactgtgcgtttgtcaagctgcgggcgtacaacccttgcactgccatcgag
tcgctggtggtcacgcccatttccaaggcctcagccagtcagagggcaggacgaggggga
cgcaaccgagccgggaagtgcttcagactatacacagaggaggattttgagaagctgcct
gcgtccacggttcctgagatgcagcgtaccaacctggcccctgtcatcctgcagctcaaa
gctctgggcatagacaacgtgctgcgattcagctttctctctcctcctccagcccagtcc
atggtccaagcactggagctgctctacgccctggggggtctggaccagtatggtcgtctg
actgaccctatgggcgtgcgtatggcagagttccccctcagccccatgtttgccaagatg
ctgctggagtcaggaaactttggctgttccaaggagattgttaccatagcagccatgatg
cagatccaaaacatcttcatggtgccagccaatcagaagaaaccagcagcgcgggagcat
cggaagtttgctgtggcggaaggagatcatctcaccatgctcaatgtctacgaagccttc
atcaagcaccagaagagctctcagtggtgtcaggaacacttcctcaactacaagggtctg
cagcgagccatgactgtacgagaacagctcaggcgactcatgaataaattcaaggtgcca
cgcacctccagcgaaggtgacccggatgtgatcctgagatgcattgtgtctgggtttttt
gccaacgctgcccgcatgcaccactcaggatcctacaggactctacgggatgacagagag
cttcacatccatccaaactccgtgctgtttggagaaaagcctacgaagtgggttgtcttc
aatgaagtcgtgcagacctctaagtactacatgcgtgatgtcacagctgtcgagtcctcc
tggttggtcgagcttgctccccacttttacaagcaggctaagcatgggtcactaaccagc
aagagatccagggtcctctga
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