Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368897
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Entry
139368897 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139368897
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139368897
04261 Adrenergic signaling in cardiomyocytes
139368897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139368897
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139368897
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_2
VWA_3
dCache_2
VWA_CoxE
BNR_assoc_N
Motif
Other DBs
NCBI-GeneID:
139368897
NCBI-ProteinID:
XP_070964475
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All DBs
Position
16:63163919..63413779
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AA seq
1037 aa
AA seq
DB search
MCVYVCFLQKYKEFERAVRVEEIDGLRLVKKLAENMEEMFHKKSEAMKRLVEAAEEAHLQ
HEDDPDLQYEYFNAVLINEVDEEGNSMELGGDFLLQPNDHFNNLSVNLSLSVVQVPTNMY
NKDSAIVNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWRPDEHGVIAF
DCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNVIAYND
EVHYVEPCLNGTLVQADVTNKDHFRMNLDKLLAKGIGMLDVGLTEAFEVLNDFNQTGRGS
VCSQAIMLVTDGAVDTYDSVFAKYNWPDRKVRIFPYLIGRESAFADNLKWMACANKGYFT
QISTLADVQENVMEYLHVLSRPKVIAQEHDTVWTEAYIDSTVSGHRSPISHMLEDGQGPI
LMTTVAMPVFSTKNETRNRGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYIL
THPDLRPLYEESKKRRKPNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVKKTVDKG
KRVLVLHNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTVEEGLHDLEHPDVQLADEWT
YCDTDEHPEHRYLSQIEAIKLYLSGREAHLKCDKELIQEVLFDAVVTAPLEAYWTSLVLN
KSENSDKGVEIAYLGTRTGLSRINLFVVPDQLTNQDFLTAEDKEGVFNADHFPLWYKRAA
EQVPGTFVYSLPFNTGKDNNSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQRKFWTAS
RQCAALDGRCSISCDNENINCYLIDNNGFILVAEDYSLTGMFFGEAEGAVMNKLLLMGSF
KRVTLYDYQAICRIFAESSDGSRALLDPYFAIFATVKWLLTELVIFMLEFNLYSWWYSDL
TAKAQRGDRTMLVPCDTEYPAFVSERTIKETTGNIDCEGCIKSFVIQQIPSSNLFMVVVD
NKCDCSDAAPITMDPIEIMYNESLKCERLKFQKDRRRPDSCHPFHPEENSMECGGALNLS
PSLMATLLCLLLVLFPR
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtacgtgtgtttcttacagaagtataaggagtttgagcgagcggtgcgtgta
gaagagatagatggattgaggttggtgaagaagctggctgagaacatggaggagatgttc
cacaagaagtctgaagccatgaagcgtctggtggaggcagcagaggaggcacacctgcaa
catgaagatgacccagacctacagtatgagtatttcaacgcagtattgattaatgaggtg
gatgaagaaggtaacagtatggagctgggaggagacttccttctgcaacccaacgaccac
ttcaacaacctgtctgtcaacctcagcctcagtgtggtgcaggtgcccaccaacatgtac
aacaaagactcagctatagtaaatggagtttactggtctgaagccttgaataaagtgttt
gtggataactttgagagggacccatccctcatatggcagtactttggcagtgccaagggc
ttcttcaggcagtacccagggatcaaatggagaccagatgaacatggtgtcattgctttc
gactgtcgcaaccgcaaatggtacatccaggcagccacatctcctaaggatgtagtgatc
ttggtggatgtgagtggcagtatgaagggcctgaggctgaccattgccagacagaccgtc
tcttccatactggacacactgggggacgacgacttcttcaatgtcattgcttacaacgac
gaggtacactatgtagagccatgcctgaatggaactctggtccaagctgacgtcaccaac
aaagaccatttccggatgaatctggataagttgctagctaaaggcatcggcatgctggac
gtaggtctcactgaagcctttgaggtcctcaatgattttaaccagacaggtcgaggcagt
gtgtgtagtcaggccatcatgttggtgaccgatggggcagttgatacttatgactctgtg
ttcgccaagtacaactggcccgacagaaaggtccggatattcccctacctgattggtcga
gagtcagccttcgcagataacctgaaatggatggcctgcgccaataaaggttacttcact
cagatttccactctggctgatgtacaggagaatgtgatggagtatttgcacgtgctcagt
cggcccaaagtcattgcccaagagcacgatacggtgtggaccgaggcctacattgacagc
accgtgagtggacaccgctcccccatctctcacatgctggaggatggtcagggtcctatt
ttgatgaccactgtggccatgcctgtgttcagcaccaagaacgaaacgaggaatagaggc
atcctgctaggtgtggttggtactgatgttcctgtctctgagctcctcaaaaccatccca
aaatataagctgggcatccatggttacgcgttcgccataactaacaacgggtacattctg
acccaccctgacctcagaccattgtatgaggagagtaagaaacgtaggaagcccaactac
agcagtgtggatctgtctgaggtggaatgggaagacaaggacgacacactgcgtaatgcc
atggtaaacaggaagactggcaccttctccatggaggtaaagaagactgtggacaaaggg
aagcgtgtgctggtactgcataatgattactattacactgacatcaaggggacccccttc
agtctaggggtagccctgtccagaggccatggaaaatacttctttagaggaaacgtcact
gtagaagaaggtcttcatgatctggagcaccctgatgtacagctagcagatgaatggaca
tactgtgacacagatgagcacccagagcatcggtacctgtctcagatagaagccatcaaa
ctctacctcagtggacgagaagcacaccttaaatgtgataaggaattgatccaggaggtt
ctgtttgatgctgtagtaacagctcctctagaggcctactggaccagcctggtactaaac
aagtcagagaactctgataagggcgtggagatagcctacctgggcacacgtactggcctc
tccagaatcaacttgtttgtggttccggaccagctgaccaatcaagatttcctgacagct
gaagataaagaaggggtgttcaacgccgatcactttcccctgtggtacaagagagcagca
gaacaggttccgggaacctttgtctactctctccccttcaacacagggaaggacaataat
agtgtagtgttggccagcactgccattcagctactggacgaaagaaaatcacccattgct
gccgctgtggggatccagatgaagctggagtttttccaaaggaagttctggacagccagc
cgacagtgtgcagcgttggatgggagatgttctataagctgtgataatgagaacatcaac
tgttacctgatagacaacaatggcttcatcctggttgcagaggactactctctgacaggg
atgttctttggagaagcagagggggcagtgatgaataaactgctcctcatgggttccttt
aagagggttactctgtatgactaccaagcgatctgtaggatctttgcagaaagtagtgac
ggttcccgtgcactattggacccctactttgccatctttgccacagtgaagtggctcctt
acagaacttgtcatttttatgctggagtttaatctgtacagctggtggtactctgacctc
acagccaaagcccagaggggtgatcggaccatgttggtgccatgtgatacagagtaccca
gcctttgtctcagagagaaccataaaggagaccactgggaacatcgactgtgagggatgc
atcaaatcatttgtgatccagcagatccccagcagtaatctcttcatggtggtggtagac
aacaagtgtgactgttctgatgctgctccaatcaccatggaccccatcgagatcatgtat
aacgagtctctgaagtgtgaacgactgaagttccagaaggaccggagacgacctgactcc
tgccaccccttccacccagaggagaactctatggagtgtggaggagctctcaacctctcc
ccatcactaatggcaacactgctctgcctgctgctggtgctgtttcctaggtga
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integrated database retrieval system
