Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368898
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Entry
139368898 CDS
T10872
Name
(RefSeq) protein Wnt-5a
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04150
mTOR signaling pathway
ocla04310
Wnt signaling pathway
ocla04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139368898
04150 mTOR signaling pathway
139368898
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
139368898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139368898
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Morphogens
139368898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
wnt
DUF6973
Motif
Other DBs
NCBI-GeneID:
139368898
NCBI-ProteinID:
XP_070964476
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Position
16:complement(63478214..63508948)
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AA seq
379 aa
AA seq
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MLFLRRLVCVCCPSAPAGSVLDSRPCVFALTLLTLLLQVVVEANSWWSLAMNPLLIPEAY
IIGAQPLCSQLVGLSQGQKKLCQLYQDHMQYIGEGAKTGIRECQYQFRHRRWNCSTVDNS
SVFGRVMQIGSRETAFTYAVSAAGVVNAVSRACREGELSSCGCSRAARPKDLPRDWLWGG
CGDNLNYGYRFSKEFVDAREREKSYAKGSFESARLMMNLHNNEAGRRTVSDLAHVSCKCH
GVSGSCSLKTCWLQLADFRKVGETLKEKYDSAASMKLNLRGKLVQRDSKFNPPTSHDLVY
IESSPDYCLSNQSTGSLGTVGRLCNKTSEGMDGCELMCCGRGYDQYKAQIVERCHCKFHW
CCYVKCKRCTKTVDQFVCK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcctgcggaggctggtgtgtgtatgctgtccctcggcaccggcggggagtgtg
ttggactccagaccgtgtgtgttcgccctcacactgctcacactgctcctgcaggtggtg
gtggaggccaactcatggtggtctctagccatgaaccctctgctgatccctgaggcctac
atcatcggtgcccagcctctgtgcagccagctggtgggtctatcccagggccagaagaag
ctgtgccagctctaccaggaccacatgcagtacattggcgagggcgccaagacgggcatc
agggagtgtcagtatcagttcagacaccgccggtggaactgcagcaccgtggacaactcc
tccgtgttcggacgggtcatgcagataggaagcagagaaacagcgtttacgtatgccgtc
agcgcggcgggggtggtcaatgctgtgagcagggcttgcagagagggggagctgtcgagc
tgcggctgtagtcgtgctgcacgtcccaaagacctgcctcgtgattggctgtggggcggc
tgcggggacaacctgaactatggctacagattctctaaagagtttgttgacgcgcgggag
cgagagaagagctatgccaagggatcctttgagagtgcacggctcatgatgaacctacac
aataacgaggctggacggaggactgtgtcggacctggcccatgtctcctgtaagtgccat
ggtgtgtcgggctcctgcagtctgaaaacgtgctggctgcagctggcagacttccgcaag
gtgggcgagaccctgaaggagaagtacgacagcgcagcctccatgaagctcaacttgcgt
ggcaagctggtgcagcgggacagcaagttcaacccccccaccagccatgacctggtctac
atcgagtccagcccagactactgtctgtccaaccagagcacaggctccctgggtactgta
ggcaggctgtgcaataagacctcggagggcatggatggctgtgagctgatgtgctgtggc
cggggctatgaccagtacaaggcccagattgtggagcgatgccactgcaagttccactgg
tgctgctatgtcaagtgcaagcgctgcaccaaaaccgtggaccagttcgtctgcaagtga
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