Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139368963
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Entry
139368963 CDS
T10872
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139368963
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GFIT
Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
139368963
NCBI-ProteinID:
XP_070964596
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Position
16:67691030..67694411
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AA seq
524 aa
AA seq
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MTASVVRSPVFHPVFMGFLALSSLEGVFTCRLGTPEECANCSFVPGYKLAGMGYDVVTLR
QKRASVFDVNSYLANSCMVCVNPLMGGELQKLPLHMKDWRAEIDCKRKTLSSYYYSVSSL
VDDIAFFIANDWKAGLKLENVDLQLAGSKSKVSGFASAHSNADKSSFSFQQFTCSVYSFS
VPSKPPLSLDFQRRIASLPHHYTSNSEAYKDIIDTYGTHYISDGDLGGMMKRVTSIRTCL
AALNKVFVSDVETCLSMGLDLDIPVGLPVDLGLNLLGGQCSKVATNSDSATGYSMGFLSH
HTEVNGGRTLNGVASMRKANIDSFLKWMKSLNEFPEMVSFSLQPLYQLVDDKQTSADLQT
AISQYVIDSGIKRIKTENQACRDSPDLSADCCPLLAGRGRLTVFVDRGFSLRGDGMAEPE
VYVKLWCSGQHRLTRWITTYDPLWHTHFNFNYVNTQSSLELQVWDKSPGERDDDLQGGCS
VNLEQGSHVHSCGLSNGSFTFSYTLTCDKHLTGDKCDQYYPSPN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatcagtcgtccgctctcccgtgtttcacccggtgttcatgggtttcctggct
ctgtcgagcttggagggagtgttcacctgtcgtctagggaccccagaagaatgcgccaat
tgttcctttgtgcctggctacaaactggctgggatgggctatgatgtcgtaacactgaga
caaaaacgggcctctgtgtttgatgtcaacagttacttggctaactcctgcatggtatgt
gtgaacccacttatgggaggtgagcttcagaaactccccttgcatatgaaggactggcgc
gccgaaattgactgcaagaggaagactctgagttcctactactactctgtcagctctctt
gtggatgatatagccttctttatagcgaatgactggaaggcggggctaaagctggagaat
gtagacctgcagttagcaggcagcaagtccaaggtgtccggctttgcatccgcacactca
aacgcagacaagtcttccttctcatttcaacaatttacctgctctgtttacagtttcagt
gtacccagcaaacccccacttagcctggatttccagcgacgcatagcttctctgccacac
cactacacatccaacagtgaggcgtacaaggacatcattgatacctacggaacccactac
atcagtgatggagacctcggagggatgatgaagagggtgactagcattcgcacctgtcta
gcagccctaaacaaggtctttgtgtccgacgtggaaacatgtctgagtatggggttggac
ttggacatacctgtaggactgcccgttgacttggggctaaaccttttgggtggacaatgt
tcgaaggtcgctaccaactctgacagtgcaacagggtacagcatgggcttcttaagccac
cacacggaagtgaacggtgggagaaccttaaatggagttgcttctatgagaaaagctaat
atagatagtttcttaaaatggatgaaaagcctaaatgagtttccggaaatggtatccttc
tccctgcagcctctatatcaactggttgatgacaaacagacgagcgctgatctacaaaca
gctattagtcagtatgtgatcgacagcgggattaagagaataaagacagagaatcaagca
tgcagggattcacctgacctctctgctgattgctgccccctgttggcagggagaggcaga
ctgactgtctttgtggaccgtgggtttagtctgaggggtgatgggatggccgaaccagag
gtttacgtcaaactgtggtgttcaggtcagcacaggctgacccgctggatcaccacctat
gatccactttggcatacacatttcaactttaactatgtaaacacccagtcctctctagag
ctccaggtgtgggataagtccccaggggaacgtgacgatgacctccagggtgggtgttct
gtaaacctggagcaggggagccacgtgcatagctgtggactcagtaatgggagtttcaca
ttctcttacacattaacttgtgacaaacacctgactggtgataaatgtgaccaatattac
ccctccccaaactag
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