Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369004
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Entry
139369004 CDS
T10872
Name
(RefSeq) transcription factor E3-like isoform X1
KO
K09105
transcription factor E3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139369004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139369004
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
139369004
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
139369004
NCBI-ProteinID:
XP_070964664
LinkDB
All DBs
Position
16:complement(72808080..72858237)
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AA seq
569 aa
AA seq
DB search
MSTYNEGQNSEETGRFDSYQNRVLVQRAPHEQPQTVFVILDTAEALNLISVEPLLPESGI
VADIEVESILPSDSDTFYQLKSQPITLSVSQPPSDTASPSTGSVMTSRVLMRQELMRQQA
RDQERREAQHQVSSAQLRTTDSSPAISMAPGHTGARPPPAQVPVEVLKVQTHLENPTWYH
IQASQRQQVKHYLSSTLGNKLTNQTLGASPSPQSGSAPSLQPAASSSPSSPLAVLSLSSN
KEEMEDVIDDIISLESSLNDEFFTLIDPGLQVANTMPVSVNMLDVFSSGGMAAPNITVSN
SCPADLHTVKTELTGTEVEAKAMMKERQKKDNHNQIERRRRFNINDRIKELGALIPKSSD
PSPCYGDRETRWNKGTILKASVDYIRRLQKEQQRAKEVETRQRKLEHSNRSLLLRIQELE
MQARLHGLSTPASSSQGSSSSHLSLSQSLDPSTGDALSRTLLSLSGGQGLQAASPSFLSP
PPSASPVGLMTMGSPLDLDSLSFSDLDDPSAAAFHASLLPDMGLGDILMDDRGLGMSSVG
GRDPLLSSVSPGVSKTSSRRSSFSMEEDL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctataacgaggggcagaacagcgaggaaacggggagatttgattcatatcaa
aatcgcgttttggtacagcgagcgcctcacgaacagccgcagactgtgttcgtcattcta
gacacggccgaagctctgaatttgatcagtgtggagcctctcctccctgagtcggggata
gtagcagatatcgaggttgagagcatcctcccttcagactctgataccttctaccagctg
aagagccagcccatcactctgagcgtgtcccaacccccctctgacacggcgtctccctcc
accgggtcggtgatgacgtcccgggtgttgatgaggcaggagctgatgcgccagcaggcc
agggaccaggagaggagagaggcccagcaccaggtctcctcggcccagctacgcaccacc
gactcctccccagccatctccatggccccggggcataccggggccagacctccccctgct
caggtccctgtggaggtccttaaggttcagacgcacctggagaacccaacatggtatcac
atccaggcctcccagagacagcaagttaaacactacctctcctccaccctggggaacaaa
ctgaccaatcagacgctgggcgcctccccctcgcctcagtccggctccgccccctctctc
cagcctgcagccagtagctctcccagcagcccattggctgtgctcagcctgagctccaac
aaagaggagatggaagacgtgatcgatgacatcatcagtcttgaatccagtctcaacgat
gagttctttacgttgatcgaccctggcctacaggtggccaacacgatgccggtgtcagtg
aacatgctggatgtgttcagcagtggagggatggctgctcctaacatcaccgtctccaac
tcctgtcctgctgacctgcacaccgtcaagactgagttaaccggtacagaggtggaggct
aaagctatgatgaaggaacgacagaaaaaggacaatcataaccagattgagagacggagg
aggttcaacatcaacgatcgcatcaaggaactgggagctctcatccccaaatcgagtgac
ccatccccctgctacggagacagggagacgcgttggaacaagggcaccatcctgaaggcg
tctgtggactacattaggaggctgcagaaggagcagcagagagccaaggaggtggagacc
agacagaggaaactggagcacagcaaccgcagcctactgctacgcatacaggagcttgag
atgcaggcccgcctccacggcctctccaccccagcctcttcctcccaaggcagctcctcc
tcacacctaagcctatcacagtccctggaccccagcacgggcgacgccctctccaggact
ctcctctccctgagtggtggccaaggcctccaggccgcctccccctccttcctgtctcca
cccccctcggcctctccggttggtctgatgacaatgggcagccccttggatctagactct
ctgagcttctctgacctggatgacccgtcggccgcagccttccacgcctccctgctgccg
gacatgggtctgggggacatcctgatggacgacaggggactggggatgtcctctgttggg
ggcagagaccccctgctctcctccgtctccccgggagtctccaagacctctagtcgcagg
agcagcttcagcatggaggaagatttgtga
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