Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369167
Help
Entry
139369167 CDS
T10872
Name
(RefSeq) proteasome subunit alpha type-1-like
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
139369167
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139369167
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ocla03051
]
139369167
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139369167
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
139369167
Peptidases and inhibitors [BR:
ocla01002
]
Threonine peptidases
Family T1: proteasome family
139369167
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
139369167
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139369167
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Plant_all_beta
Motif
Other DBs
NCBI-GeneID:
139369167
NCBI-ProteinID:
XP_070964724
LinkDB
All DBs
Position
2:50458123..50470960
Genome browser
AA seq
262 aa
AA seq
DB search
MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSRTHAVLVALKRAQSELAAHQ
KKILHVDEHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPASRLVTLIGSKTQIPT
QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERHMDTFL
DCNLNELVRHGLLGLRETLPAEQDLTTKNVSIGIVGKDMEFTIYDDDDVGPYLEGLEERP
QRKVIGAADEPAADKPDEPMDI
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtaaccagtacgacaacgatgtcacagtatggagtcctcaggggcgcattcac
cagatcgaatacgccatggaggcggtgaaacaaggttcggctacagtggggctcaagtcc
agaacccatgcagtcctggttgctctcaagcgagcccagtcagagctggctgctcaccag
aagaagatcctccacgttgatgaacacattggcatctccattgccgggctgactgcagat
gccaggctactctgtaatttcatgaggcaggaatgcctggactccaggttcgtgtttgac
aggcctctcccagcatcgcgcctcgtcactctcatcggaagcaaaactcaaattcccaca
cagaggtatggaagaagaccctatggtgtgggactgcttatcgctggctacgatgacatg
gggcctcatatcttccagacctgcccctctgcaaactactttgactgcaaagccatgtcc
attggagctcgctcccagtctgcccgcacatacctagagagacacatggacaccttcctg
gactgtaatctgaatgagctggtcaggcatggtctgcttgggctcagagaaacactccca
gctgaacaggacctcaccactaagaatgtctcaatcggcattgtggggaaagacatggag
ttcaccatctacgacgatgatgacgtgggtccttatcttgagggtctggaggagaggcca
cagagaaaggttatcggggctgcagatgagcctgcggcagacaaaccggatgagccaatg
gatatctga
DBGET
integrated database retrieval system
