Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369373
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Entry
139369373 CDS
T10872
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139369373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139369373
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Serotonin (5-HT3)
139369373
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
HTH_SB
HTH_38
HTH_7
HTH_23
Motif
Other DBs
NCBI-GeneID:
139369373
NCBI-ProteinID:
XP_070964756
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Position
17:24917532..24931783
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AA seq
474 aa
AA seq
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MAKMKELSKDVRDQIVDLHKAGMGYKTIAKQLGTVSPERVCSYQDVLDHLNLTRGNDVFT
STRPVLDHTHPTMVHLDVYLYAILAVIEKSQTFVPFIWIQLTWNNERIWWDPSQFCGISR
VSVPKEMLWIPDLLIYEMIEKDDGPHSPYLYVSHDGIVLIEDEMKVVSTCKMDVHKFPFD
TQRCNITFSSAIHIVTDIQLIPFSNSSRVTQASREVMQTQGEWEFLDMTVSRGKLILDRE
WDQISYTITMARRPLLHVINFLLPILFFLCLDLASFLISDQRGEKLGFKVTVLLAISVLL
LILNDILPSMSNRTPLIATYCIVIFAFMLLSLLETILVTHLMERDSVHQETGIDRAPAYD
CDNKPDHTPDSEEERRRGCCACICDVSGRKAPCEPLPVAEEVICSEQGESRLLLLILGDL
RAVERTLALFASGRREGKPGYWTRVARRLNAAFFTIYLISVMLFISLMCKEWLN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatgaaagagctctccaaggatgtcagggaccagattgtagacctacacaag
gctggaatgggctacaagaccattgccaagcagcttggtacggtgtcacctgagagggtg
tgtagttatcaggatgttctggaccacctgaacctgaccagaggaaatgatgtgttcacc
tccacgcggcccgtgctcgaccacacacacccaaccatggtgcacctggatgtctacctg
tacgctatcctcgccgtgattgagaagtcccagacctttgttcccttcatctggatacaa
ctgacctggaataatgagcggatctggtgggatcctagtcagttctgtggaatatccagg
gtctccgttcccaaagagatgttgtggataccagacctcttaatctatgagatgatagag
aaggatgatggccctcacagcccatacctgtatgtgtcccatgatgggatcgtcttaata
gaggacgaaatgaaggtggtcagcacctgtaagatggacgtccacaagttcccctttgac
acacagagatgtaacatcacattcagctctgccatacacatcgtgacagatatacagctc
attcctttctctaactcgtcccgggtcacccaggcttctcgtgaagtcatgcaaacgcag
ggagagtgggagttcctggacatgactgtctccaggggcaaactaatcttagatcgcgag
tgggaccagatctcatacactatcaccatggcgaggaggcccctcctccacgtcatcaat
ttcctgcttcccatcctgttctttctgtgtctggacctggcctccttcctgatctcagac
cagcggggggagaaactaggctttaaggtcaccgtgctgctcgccatctctgttttgctg
ctcatcctcaatgacatactgccctccatgtcaaacaggacccctctcatagcgacctac
tgtatagtgatctttgccttcatgttgctaagcctgttggagaccatcttagtgactcac
ctgatggagagagattccgtacaccaagagacaggtatagaccgcgccccagcatatgac
tgtgacaacaaaccagaccacacccccgactcagaggaggagaggaggcgtggttgctgt
gcctgtatctgtgatgtgtctggaagaaaagctccatgtgaaccattgcctgttgcagaa
gaggtcatctgtagcgagcaaggagagtctcgcctgctgctgttgattctgggggaccta
cgggcggttgagcggacattagcgttgttcgccagtggcaggagggaggggaaacctggc
tattggaccagagtggcacggcgcctcaacgccgccttcttcaccatctacctcatctct
gtcatgctcttcattagccttatgtgtaaggagtggttaaattag
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