Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369380
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Entry
139369380 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: CCN family member 5-like
KO
K23089
CCN family member 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139369380
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Others
Insulin-like growth factor-binding proteins
139369380
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Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_CCN
IGFBP
Cys_knot
VWC
Motif
Other DBs
NCBI-GeneID:
139369380
NCBI-ProteinID:
XP_070964761
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All DBs
Position
17:<26199830..26212352
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AA seq
385 aa
AA seq
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WHRGFLEEIERKREQERTGXPLKMDQRDATLLGSLLLCIITQVCCQLCGGPCHNCPRPAP
RCPLGVSTVLDGCRCCQVCARQEGEDCTERFVCDSQQGLQCDYSASYPGGPGECVSQNML
GCELNGMRFEEGQTFQQSCAQLCHCLGGGVTCVPLCSDDLQVPAAANCPNPQLVRQPGRC
CREWVCESLDNNIYPDTMAAGNPVEKPPERERVRHGFRGDGGGAQSQGQGLNSNCIEQST
DWSPCSSSCGPGVSTRSSNKNWACRLQTQTRLCQLRPCQATAVPRSRSHVGTGACDSSFR
SPVPIHLEHQGCLSTWAYRLRFCGLQCLEGRCCSPYHTRTVNMAFRCPQGRMIHQQVMMI
ESCSCHHYNCPQSPFTAYRRAIHRL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
tggcaccgcggctttcttgaggagatagagcgaaagagagagcaagagagaactggctaa
cccctgaagatggaccaaagagatgctacgctccttggttccctgctgttgtgtatcatc
actcaggtgtgctgccagctatgcgggggcccgtgtcacaactgccccaggcccgcacca
cgctgccctctgggggtgtccacggtgctggatgggtgccgctgctgccaggtgtgcgcc
agacaggagggcgaagactgcacggagaggtttgtgtgtgacagccagcagggcctgcag
tgtgactacagtgccagctaccccggtggtcctggagagtgtgtcagccagaacatgctg
ggatgtgaactgaacggcatgcgcttcgaggagggccagacattccagcagtcgtgtgca
cagctgtgccactgcctgggtggcggggtgacctgtgttccactgtgcagcgatgaccta
caggttcctgccgcagccaactgccccaaccctcagctagtgcgccagcctgggaggtgc
tgcagggagtgggtctgtgaaagcctggacaacaacatttacccagacactatggctgca
ggtaacccagtggagaaaccaccagagagggagagggtgcgtcacgggtttcgtggtgat
ggtggtggggctcagtctcagggccagggcctgaactccaactgcattgagcagagcaca
gactggagcccctgctccagcagctgtggcccaggtgtctccacccgcagctcaaacaag
aactgggcctgccgcctgcagacccaaaccagactgtgccaactcaggccatgccaggcc
actgccgtgcctcgcagcaggtcgcatgtgggaactggtgcctgcgatagtagcttcagg
tctcccgtgcccattcatctggagcaccagggctgtttgagcacgtgggcctacaggtta
cggttctgtggcctgcagtgtctggaaggccgctgctgcagcccctaccacaccaggact
gtcaacatggccttccgctgcccccagggcaggatgatccaccagcaggtgatgatgatt
gagtcctgctcctgccaccactacaattgtccccagtccccattcacagcctacaggaga
gccattcaccggctttag
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