Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369437
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Entry
139369437 CDS
T10872
Name
(RefSeq) protransforming growth factor alpha-like
KO
K08774
transforming growth factor, alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04012
ErbB signaling pathway
ocla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139369437
04012 ErbB signaling pathway
139369437
04020 Calcium signaling pathway
139369437
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139369437
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139369437
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4840
EGF_laminin
EGF_Teneurin
Trp_oprn_chp
Motif
Other DBs
NCBI-GeneID:
139369437
NCBI-ProteinID:
XP_070964803
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Position
17:complement(44260858..44272496)
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AA seq
193 aa
AA seq
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MMNRAFWDVIFLITGSLFTYGTGQDNSTIATNSTMTTSPPVTTTTVNIMLFSTTTSTITT
TNLPVKKFVAAAVRSHFDDCPDSHSHFCFHGTCRFLILEETPACVCHQGFVGMRCEHADL
LAVVATNHRQQTVATALVLCVIGCVLTMLLCTLLHCWWRRDGLGRRHRLHCAPEKQESRL
KGRGPCCHSESVV
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgggcattctgggatgtgatctttctcattactgggtccctctttacctat
ggaaccggacaggataattctactattgctactaattctactatgaccaccagccctcct
gtgactactaccactgtaaacattatgctattttctaccactaccagcaccattactaca
accaaccttccagttaaaaagtttgtggcagcagctgttcgatcacacttcgatgactgt
cctgactcgcacagccacttctgtttccatggcacctgtcgtttcctgattctggaggag
acccctgcatgtgtgtgtcaccaaggctttgtagggatgcgatgcgagcacgccgacctg
ctagccgtggtggccaccaatcacaggcaacagacagttgccacggcgctagtgctgtgt
gtgattggctgtgtcttgacgatgcttctctgtacacttttacattgctggtggaggcgg
gacggtttggggcggaggcacagactccactgtgccccagagaaacaagaaagtaggctg
aagggccgaggtccctgctgtcactctgaaagtgtggtttga
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