Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369581
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Entry
139369581 CDS
T10872
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ocla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ocla01100
Metabolic pathways
Module
ocla_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
139369581
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
139369581
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139369581
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
139369581
Glycosyltransferases [BR:
ocla01003
]
O-Glycan biosynthesis
Glycosaminoglycan
139369581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
139369581
NCBI-ProteinID:
XP_070964931
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All DBs
Position
17:complement(12063386..12194673)
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AA seq
969 aa
AA seq
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MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEERENGGGGASNMREKRDR
VGGGGYKGSSEYMKREVQLQHHPPQGKGTVRHIQQPDGYYSHRPKEKVRVDSNNENSVPK
DFENIDNSNFGARSQPQRQPPGGADSNKRRERLQEKAHAEQATWKDNVPIFSRSSNEVLQ
YGRAVAQNGSLPVGPKAVGAGVGSRNHHSRSSQPQSQGQAQTYPQSQSHPQTQHRHQHQH
QTRKQATAAPLEVVYDQPPKCEISGKEAISALSRAKTKECRQQIAEVYCRHKEGQLMPEK
VTRYCRIEGKANANVAWEEDSSEGPPSAPVRIAFVLVVHGRASRQFQRLFKAIYHTSHYY
YIHIDQRSNYLHRQVQALASQYPNVRVTPWRMATIWGGASLLTMYLRSMADLITMTDWSW
DFFINLSAADYPIRTNSQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMW
RLGDRKIPEGISVDGGSDWFLLNRPFVEYVINSQDDLVTNMKRFYTYTLLPAESFFHTVL
ENSAHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTSRPTFF
ARKFEASVNQEIVNQLDGYLFGPMPQGTPGLQAYWESAFDEADGVATLSDTQLTLYHAFA
RMGLARAAASLQGDPKDDSCRYFPMGHPVSVHLYFQSDQFQGYLVQHHATNLATSKLETL
ETWVMPRMTYKVASPPSTFTRLQFTEIGTEWDAKERMFRNFGGLMGPMDETVGMQRWSKG
PNVTATVVWIDPTNVIAATYDILIDASAEYTHYRPPLNQPLRPGVWTIRVLHHWSPVAET
RFLISPLAYMKHQPIRQEDTLKLHNGPAKNSYMEQSFHGLNPMLNIPVHLGQVEQAKRNA
ALTGPALEHWVDGLVGAMWEAGDVCSTSMTGGPGTSCPVMQTCAKTPWSSLSPDPKSQLV
PPHADGRIR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggctcgtgcgctcgcaggttggcccgccgctcgcgttccgccttgatagcg
gctctcaccgtgctgctggtccagacgctgatagtgtggaacttcagtagcctcgattcc
ggggaagaacgggaaaacggcggcggtggcgcgtcgaacatgagggagaagagagaccgg
gtcggcggcggtggctacaaaggcagcagcgagtatatgaagcgcgaggttcagctacag
caccatcctccacaagggaaaggaacggttcgtcacatacagcagccggatggctactat
tcccaccgccccaaggagaaagtcagagtggacagcaacaatgagaactctgtgcccaaa
gactttgagaacatagacaatagtaactttggcgcccgttcgcagccccagcgccagcct
ccagggggcgctgacagtaacaaacgcagggagaggctgcaggagaaggcccatgccgaa
caggcaacctggaaggataacgttccaattttcagccggagctccaacgaggtcctccag
tacggacgagccgtagcccagaatggctcacttcctgtgggcccgaaagcggttggagcc
ggggtgggctccaggaaccaccacagccgctcttcacagccacagagccagggtcaggct
cagacttacccacagtcgcagtcccacccccagactcaacatagacaccaacaccagcat
caaaccaggaagcaggcgactgcggctccattggaggttgtttacgaccagccgcccaag
tgtgagatcagtgggaaggaagcaatttcggctctgtccagagccaagaccaaggagtgc
cggcagcagatagctgaagtgtactgcagacacaaggaaggtcaactgatgcctgagaag
gtcacccgctactgtcgcatagagggtaaggccaatgccaacgtggcgtgggaggaggac
tcgtcagagggcccaccgtcggcccccgtcaggatagccttcgtcctggtggtccacggc
agagcctcacgacagttccagagacttttcaaggccatctaccacacctcacactactac
tatatacatatagaccagcgctccaactaccttcacagacaggtgcaggccctggcctcc
cagtaccccaacgtgagggtgacgccctggaggatggctaccatctggggcggtgccagc
ctgctcaccatgtacctccgcagcatggcagacctcatcaccatgaccgactggagctgg
gacttcttcatcaacctcagcgctgcagactaccctatcagaaccaacagccaactggtg
gccttcctgtccaagtacagagacatgaacttcatcaagtcccacggcagagacaacgcc
aggtttatccgcaaacagggtctggaccgacttttctttgagtgcgacacccacatgtgg
cgacttggcgaccgcaaaatcccagaaggcatttctgtggacggcggttctgattggttc
ctgctcaatcgtccgttcgtggagtacgttataaactcccaagacgacctggtcaccaac
atgaagcgcttctatacctacacactgctgcccgccgagtcgttcttccatacggtattg
gagaacagtgctcactgtgagagcatggtggacaacaacctgcgcatcacgaactggaac
aggaagctgggctgtaagtgtcagtacaaacacatagtggactggtgcggctgctccccc
aacgactttaaacctgccgacttccaccgcttccagcaaacgtcccgtcctacgttcttc
gccaggaagtttgaagccagtgttaaccaggagatagtgaaccaactggatggctacctg
tttggacccatgccccaggggacccctggcctccaggcctactgggagagtgcgtttgac
gaggcggatggggtcgcaaccctgagcgacacacagctcacactctaccatgcgtttgct
cgtatgggcctggccagggcggcagcatcgctgcaaggagatcctaaggatgacagctgc
aggtatttccccatgggccacccggtgtcagtgcatctctacttccagtcagaccagttc
caaggctacctggtccagcaccacgccactaacctggcaaccagcaagctggagaccttg
gagacctgggtgatgcccaggatgacctacaaggtggcttccccgcccagcaccttcacc
aggctgcagttcactgagatcggcacagagtgggatgccaaagagcgcatgttccgtaac
ttcggtggtctgatgggtcccatggacgagacagtcgggatgcagcggtggtccaagggc
cccaacgtgaccgccaccgtggtgtggatcgaccccaccaacgtcatcgctgccacctac
gatatcctgatcgacgccagcgcagagtacacccactacagaccccccctgaaccagcct
ctcaggcctggggtgtggaccatacgagtgttgcatcactggagccccgtggccgagacg
aggtttctgattagtccgctggcttatatgaagcatcagcctataagacaagaggacacg
ctgaagctccacaatggaccagccaagaacagttatatggagcagagcttccacggcctc
aaccccatgctcaacatccctgtacacctgggccaggtggagcaggctaagcgcaacgcc
gccctgactggccccgccttggagcactgggtagacggcctggtgggtgcgatgtgggag
gctggggacgtgtgttccacctccatgacagggggacctggaacatcctgccccgtcatg
cagacctgcgccaagaccccctggagctcgctcagcccggaccccaagtcccagctggtc
ccgccgcacgccgacgggcgcatcaggtag
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