Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369582
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Entry
139369582 CDS
T10872
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139369582
03037 Cilium and associated proteins [BR:
ocla03037
]
139369582
Transporters [BR:
ocla02000
]
Other transporters
Pores ion channels [TC:
1
]
139369582
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139369582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
139369582
NCBI-ProteinID:
XP_070964932
LinkDB
All DBs
Position
17:12363848..12403135
Genome browser
AA seq
1017 aa
AA seq
DB search
MSHYNNTGGYNNPAYHDSDTLEIDRSPRKSQSHHSNPHGNPYPRDDGAGGERGRSDLQQL
PGGVQSSYNDAQERVPWGGWQEGSWRGRDSIPMGLLPPRSESPRWQQHDLNHSGYQIDQA
THYDTTPPVRLPSATSGHVSMRFRGSRKMSLFPVGEAALGNLGLSEDDIRNEMENEEQNL
VQELVAMSTRDRIKAIRDLPMSFDDKKHIRGQVLALKSFKKSRQLNCFADCSTTVSLAFR
RCGANMTLAKQTLELWRGTMKEVGGKFGTGVLSYFKFLKWLLMFNIFSFLVNFGFITIPQ
LIYHPTPDIPAGVSFKGLEILTGAGYFSHTVMYYGGYSNKTQGTGGRSEYNMQLAYFFTV
AAYMVLCGAALIYSMASSFRKKYVLADSGLGGAWQLLCSWDFSVTNEKAVRQRKNNLRIQ
LKESLSEKVQVALLPLTERLKHYGVFLGTWLLSTGMALGCGASVYFLCQYDTWRTRQSSD
KPSGSLLEEAATLLLPFVVSLINLVVPLFYSLFKKIEHYSNPRMQVYAIIVRNVILKMSI
LGILCYYWMKDVANTFSCWESIVGQALYRLVIMDFLFIMLGSFFGEFLSNVIGTKCIQSL
GVPEFDVARNVLDLIYAQTLAWIGIYFSPLLPVIQIIKFFILFYLKKVSLTLNCQPPRRA
GRAAQMQTIFIAILFFPSFVGALSMVAYTVWTLPPSDKCGPFRGLNTTFSAIQIWMDDLN
RVDAFQWTVWIYQHVIRSEIFYFLVSLIILVFIYIFRQITQGRQLLIILLRQQIVNEGKD
KAFLLEKLQNLQKSKQSKQKNKKQVRKRQENESSTGMLQALIARQRLEQENGDSSSSFGV
PMPSGHSVSTTSSAMIQAMLARQYAEDQDVASYRGVPFPADQTPAPSSALIQAMQARQRA
ESQNEDEFYRAPVQSQNPVNALPSAMIQVMQARQRVESEQEEDQFYRAPVHSEHPVSSTP
SAMMQVMQARQRAEEEESEFYQAPASSQHPDASGTGSALIQAMLARQQVEEEYGDRY
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtcacactacaacaacactggaggatataacaaccctgcctatcatgacagtgacacc
ctggagatagataggagtcctaggaaatcccaatcccatcacagtaacccccatggtaac
ccctaccccagggatgatggagccgggggtgagaggggcaggtctgatcttcagcagctc
ccaggaggggtccaatccagctacaacgatgcccaggagagagtgccctggggcgggtgg
caggaggggagctggaggggcagagacagcattcccatgggtctccttcctccccggtcg
gagagcccacgatggcagcagcatgacctcaatcacagcgggtaccagatcgaccaggca
acgcattatgacacaacgcctcctgtacgacttccatctgcaacttcaggtcatgtttcg
atgaggttcagggggtcgaggaagatgagtctattccctgtaggagaggctgctctgggc
aatctgggcctttctgaggacgacatcaggaatgagatggaaaatgaggaacagaacttg
gtccaagagctggttgctatgtcaacgagggacagaatcaaggccatccgagacctccct
atgagctttgatgacaagaaacacatcaggggccaagtgttggcgttgaaatcattcaaa
aagtcccggcaactgaactgctttgcggactgctcaacgactgtctcactggcattccgc
aggtgcggtgctaacatgactttagccaagcagaccctggaactgtggcggggtaccatg
aaggaggtcggaggtaaatttggcacgggggtcctctcctacttcaagttcctaaaatgg
ctgctgatgttcaacatcttctccttcctggtcaactttggtttcatcaccatcccccag
ctcatctatcaccccacgccagacatccccgctggggtcagcttcaaagggctagagata
ctgaccggagcgggttatttcagccacacagtgatgtattatggcggctacagtaataaa
acacaagggacagggggccggtctgagtacaatatgcagctggcctacttcttcaccgta
gcagcctacatggtgttgtgtggagccgccctcatctacagcatggccagctcattcagg
aagaagtatgtccttgcagactcaggcttgggtggagcctggcagctcctgtgtagctgg
gacttcagtgtgactaacgagaaagccgtacgccagcgcaagaacaatctgcgcatccaa
ctcaaggagtccttatcagaaaaggtccaggtagccctgctacctctgacagagaggctg
aagcactatggggtcttcctgggtacctggctgctctccacgggcatggccttgggctgt
ggcgccagtgtctacttcctgtgtcaatatgacacatggcggacgaggcagtcatcggac
aaaccttccggctctctcctggaggaggccgctactctcctcctcccctttgtggtgtcc
ctgatcaatctggtcgtccctctcttctactctctgttcaaaaagatagagcactactcc
aaccctcgcatgcaggtctatgccatcatagtcagaaatgtcattctcaagatgtccatt
ctgggtattctctgctactactggatgaaggatgtggccaatacattttcatgctgggag
tccatcgtaggacaagccttgtacagactggttattatggacttcctcttcataatgtta
ggatccttctttggagagttcctgagcaatgtcattgggactaaatgcatacagagcctg
ggagttccagagtttgacgttgccaggaatgtccttgacctgatctatgcacagaccctg
gcatggatcggaatctacttctctcccctcctcccagtgatacagataatcaagttcttc
atcctcttctacctaaagaaggtcagcctgaccctgaactgccagccccccaggcgagcc
ggcagggcggctcagatgcaaaccatcttcatcgctatcctcttcttcccttccttcgtg
ggggctctgtccatggtggcctacaccgtgtggactctgcccccctcagacaagtgtggg
cccttcaggggcctcaacaccaccttcagtgcaatacagatctggatggacgatttgaac
agggtggatgcgtttcagtggactgtctggatctaccagcacgtcatcaggagtgagata
ttctacttcttggtctctctcatcatccttgtcttcatttacatcttcaggcagatcact
cagggacgccagctgcttatcattctactgagacagcagattgttaatgaagggaaggac
aaggcgttcttgttggagaagctacagaaccttcagaaatccaagcagagcaaacagaaa
aataaaaaacaggtcaggaaaagacaggaaaatgaatcctctactggcatgctccaggct
ctgattgcccgacagcggttggagcaagagaatggtgacagcagcagctctttcggtgtg
cctatgccttccggccactcagtctccacgacatcgagtgctatgatacaggccatgcta
gccaggcaatacgcagaggaccaggatgtagccagttatcgcggggtgccatttcctgca
gaccaaacacctgcgccctccagtgcactgatacaggccatgcaagccaggcaaagggcg
gagtcacagaatgaggacgagttttaccgggcgccagttcagtcacagaacccagtaaac
gcgttacccagtgcgatgatacaggtgatgcaagccaggcagagggtggagtcagagcag
gaagaggaccagttttaccgggcgccagttcattcagaacacccagtgtcatcaacgccc
agtgcgatgatgcaggtcatgcaggccaggcagagagcagaggaggaggagagcgagttt
taccaggcgcctgcttcttcacagcacccagatgcgtcaggcaccggtagtgctctgata
caggccatgctagcccgacaacaggtagaggaggagtacggtgacagatactga
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