Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369635
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Entry
139369635 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel gamma-5 subunit-like
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139369635
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139369635
04261 Adrenergic signaling in cardiomyocytes
139369635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139369635
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139369635
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Motif
Pfam:
PMP22_Claudin
Claudin_2
SUR7
DUF4064
DUF716
Motif
Other DBs
NCBI-GeneID:
139369635
NCBI-ProteinID:
XP_070965000
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Position
17:20719027..20752119
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AA seq
280 aa
AA seq
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MTLCGRKVLTVLSSVFAVCALGLLGIAVSTDYWLYLEEGVILPLNQSTELRMSLHSGLWR
VCFTAGDEKGRCFTIEYVMPTNVQLTSESTVSVLKMIRSATPFPLVSLFFLFIGFVLSNI
GHIRPHRTILAFISGIFFILSGLSLVVGLVLYISSINDEMLNRTKTNEAYFSYQYGWSFA
FAAISFLLTETAGVMSVYLFMKRYTAEEMYRPHPGLYGPRHSNCSDYSGQFLHPDTWDQH
GRSPSSISSEASLQMNHSLHSNYPALLKCPEYDRMSSSPC
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgtgtggcaggaaggtgttgacagtgctaagcagcgtgttcgctgtgtgcgcc
ctgggcctgctgggcatcgctgtcagtactgactactggctctatctggaggagggcgtc
atcctgcccctcaatcagagcactgagttacgcatgtccctgcactcgggcctctggagg
gtctgcttcacagctggagatgagaagggtcgttgtttcaccattgagtatgtgatgccc
accaacgtgcagctgacgtcggagtctacagttagtgtgctgaagatgatccgttcagcc
actcccttccccctggttagtctcttcttcttgttcattggttttgtcctgagcaacatc
ggacatatccggccccaccgcaccatcctggccttcatctccggaatcttcttcatcctc
tcaggtctgtctctggtggtgggcctggtgttgtacatctccagtattaatgatgagatg
ttgaacaggaccaagaccaacgaggcctacttcagttaccagtatggctggtccttcgct
ttcgctgccatctccttcctgctcactgagacggccggcgtcatgtccgtctacctgttc
atgaagcgctacacggccgaggagatgtacagaccccacccgggcttatacgggccgcgc
cacagcaactgctccgactactctggtcagttcctccacccggacacctgggaccagcac
ggccgcagcccctccagcatctccagcgaagcctcgctccagatgaaccactccctccac
tccaactacccagcgctcctcaagtgtccagagtatgaccgcatgtcctcctccccatgc
tga
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