Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369710
Help
Entry
139369710 CDS
T10872
Name
(RefSeq) growth/differentiation factor 5-like
KO
K04664
growth differentiation factor 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139369710
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139369710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139369710
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139369710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
139369710
NCBI-ProteinID:
XP_070965071
LinkDB
All DBs
Position
17:complement(32407145..32413873)
Genome browser
AA seq
538 aa
AA seq
DB search
MKFLKRLPLLLGCWTLLYLEFIPVSLSHTGTAQRATESRGKEHAGGAGKEANPGITSTAR
STVGNYGVAGWKSPSAARITRIRTGPPLIKGDAAKAKAVTSVSSPHGVTASSVSGTIHLG
RKESARSWVPDGDATNAAAVPALMALNVQTRKGGDTPRQSKGKTFPRVATSARTGQHRVI
AVQKYSAPLAQRSAKAPGKLSDRDLPKHPLVTPHDYMLSLYWSLSTGEVNTSVLHEAGMA
NTITSFVDKGQDDRLLQLRRQKYNFNISSLEEEGLLGAELRILRKRLADPRKALSTDRVF
CLKLFTCAAGKQKATLLQTRTIEDHNTPKWEVFDIWKLFKNFHNTVQLCFELEALERGRP
VDLRAMGFSRLGRQTKEKAFFLVFGRTKKRDLFYSEIKARSGHDNKTVYEYLFTQRRMRR
APTTRGKKLAKNPKPRCHRKQLHVNFKEMGWDDWIIAPLEYEAYHCDGVCDFPIRSHLEP
TNHAIIQTLMNSMDPDSTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcctgaaacgtctccctcttttattggggtgttggactctcttatacctggaa
tttatcccagtgtcactgagccataccgggacggcacagcgcgcaaccgagagccgaggc
aaggagcacgcaggcggagcaggtaaagaagccaacccgggaatcacctcaactgccagg
tctacggtaggaaactacggcgtagcgggttggaagtctccgagcgctgcgaggatcacg
cgcattaggacaggacccccgctgataaagggcgatgcagccaaagcaaaagctgtaaca
tcagtgtcatcaccacacggcgtaacggcgagtagtgttagtggaactatccatttggga
cgcaaggagtctgcgcgctcttgggtacccgacggggatgctaccaacgcagctgctgtg
cctgctctcatggcgttgaacgtgcaaacacgcaaaggcggagatacgcccagacagagt
aaaggaaagacgttccccagagttgcaacatcagcacgaactggacagcatagagtcatt
gctgtgcaaaaatacagcgctccgttagcccaaaggagtgccaaagcaccgggcaaactg
agcgacagagaccttccgaagcacccattggtgactccgcacgactacatgttgtcactg
tattggtcactatccacaggagaggtgaacaccagcgttttgcacgaggctggcatggcc
aacaccatcaccagctttgtggataaaggacaagatgaccgtcttctccagctgagaaga
cagaagtataacttcaacatcagttccctggaggaggaggggttactgggtgccgagctg
cgcattctcaggaaaagactggccgacccacgcaaagcactttctactgacagagttttc
tgcctgaagcttttcacctgtgcagcaggtaagcagaaagcgacactgctccaaactcga
accatcgaggaccacaatacgcccaaatgggaagtatttgacatttggaaactattcaag
aatttccacaacaccgtccagctttgtttcgagctggaggccttggaacgaggccgccca
gtggacctcagggcaatgggcttcagtcgtctgggcaggcagaccaaagagaaggccttt
ttcctcgtgttcggacgcaccaagaaacgcgacttgttctacagcgagatcaaagcccgg
tcgggccacgacaacaagactgtgtacgagtacctgttcacccagcgccgtatgcgccga
gcccccaccacccgtggcaagaaactggccaagaaccccaagcctcgttgccacaggaag
cagctacatgtcaacttcaaggagatgggttgggatgattggatcattgccccactggag
tatgaggcctaccactgcgacggggtgtgcgacttccccatccgctcgcacctcgagccc
accaaccacgccatcatccagacgctcatgaactccatggaccctgactcgactccgccc
acctgctgcgtgcccactcgcctcagcccgatcagcatcctctacattgactcagccaat
aacgtggtttacaaacagtacgaggacatggtggtggagtcctgtggctgcaggtag
DBGET
integrated database retrieval system
