Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369735
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Entry
139369735 CDS
T10872
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
139369735
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139369735
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
139369735
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
FORS blood group (Forssman antigen)
139369735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
139369735
NCBI-ProteinID:
XP_070965096
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All DBs
Position
17:38284685..38289925
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AA seq
352 aa
AA seq
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MVLFPLCKLLSGSVRVTKKQLVLYCLLLSLLVYFLRWRRAVLKVDTHPLPLSLEAESGSV
VRDIVVGSVEEQQQRLPLETSWGAPLVWGDSDGSAWRRAEFAHRSVRTGLLTLAVGPYGH
FLRRFLSSAELYFLPGNSVVYYVLTDSPRALDPLTPLGPGRELRVVPVAEMPGWERLAQG
RMALLAATIKEPVRHEVEYVFCMDVDQELVAPVGTEILGELVAALHPELYGMPRHTFPYE
HEPASLAHVDEDEGDYYYTSELYGGLCADVYAMAQACSQLILQDQEKGLRARGLEESYLN
RYLINRRPTCVLSPEYSWWDSALAADVPTRRVVSLGRQCDSLEPQKRQEQDC
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgttcccactctgcaaactgctctcagggtcagtcagagtgaccaagaagcag
ctggtcctgtactgtctgctcctatctctgctcgtatactttttaagatggaggagagca
gtgctcaaggtggacacgcaccctcttcctctttctctggaggcggaatcaggaagtgtg
gtcagagacatagtggtgggcagtgtggaggaacagcaacagcgcctcccgctggagaca
tcctggggcgctcctctggtgtggggcgactctgacggctcagcgtggcggagggccgag
tttgcccaccgcagcgtccgcacaggcctgctgacgctcgccgtggggccctacggccac
ttcctacgccgcttcctctcctcggccgagctctacttcctgcccggtaacagtgtggtc
tactacgtccttacggacagccctcgcgccctggatcccctgaccccgctgggccctggc
agagagctgagggtggtccctgtggcagagatgcccggctgggagcgtctggcccagggc
cgcatggccctgctggcggccaccattaaagagccggttaggcacgaggtggagtacgtc
ttctgcatggacgtggaccaggagctggtggccccggtgggaactgagatcctgggggag
ctggtggccgcgctgcacccggagctctacggcatgccccgccacaccttcccgtacgag
catgagcccgcctcgctggcccatgtggatgaggacgagggcgactactactacacgtcg
gagctgtacgggggtctgtgcgctgatgtgtacgccatggcccaggcctgctcccagctc
atcctccaggaccaggaaaaggggctgagggctcgtggactggaggagagctacctcaac
cgctacctgatcaaccgcaggcccacctgtgtcctctcgcccgagtacagctggtgggac
tcagccctggccgccgacgtgcccacaagaagggtggtgtccctggggaggcagtgtgac
tccctggagccacaaaagagacaggagcaggactgctga
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