Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369843
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Entry
139369843 CDS
T10872
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139369843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139369843
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
139369843
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
139369843
NCBI-ProteinID:
XP_070965224
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Position
17:complement(56669978..56670833)
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AA seq
162 aa
AA seq
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MAPVNICDMVMTTKDKIKFRKPVVEKMRRDRINSSIEQLKTLLKTELQAHQPNSKLEKAD
ILETAVVYLKDNSMRPAASFNVASPVQSYAEGFTRCLEETLRFLSAKNQPTGSQQKLLNH
FHRAQKLGDRVVLSPNRAMVPHNSSTPKRVTPGGRGPMWRPW
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtcaatatttgcgacatggtgatgaccacgaaagataaaatcaaatttaga
aaaccagtggtggaaaagatgcgccgagaccgcattaacagcagcatcgaacagctcaag
acactcctcaaaaccgaacttcaagcacaccaacccaactcgaaactggaaaaggctgac
attctcgagacagctgtggtttacctgaaagacaacagcatgcgccctgctgcttcattc
aacgtagcgtcacctgtccaaagctacgcggagggattcacccgctgcctggaggagacg
ctgcgctttctctcagcgaaaaaccagccgactggctcacaacagaagcttcttaatcac
ttccatcgcgctcagaaactcggtgatagagtcgtgctgagtccaaaccgcgcaatggtc
cctcacaacagcagcactccgaaacgtgtcaccccaggtggaagagggcccatgtggaga
ccctggtga
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