Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369879
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Entry
139369879 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04217
Necroptosis
ocla04622
RIG-I-like receptor signaling pathway
ocla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
139369879
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
139369879
04625 C-type lectin receptor signaling pathway
139369879
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139369879
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139369879
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139369879
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C67
139369879
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139369879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
DZR_2
Motif
Other DBs
NCBI-GeneID:
139369879
NCBI-ProteinID:
XP_070965262
LinkDB
All DBs
Position
17:64236748..64245675
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AA seq
707 aa
AA seq
DB search
MESKREGKDKFFIVTRGKARKGFARGCIGRVEAEMQKGELMGLLYGGGSSGGNPKSGGMV
KMEDTYPLTCHQAQLLLFVSPSSKRLELLCNPQLFLAICVLSQDDLVVVKHKKGHQPGLV
RNLMLIGKKENQGDLLMLGFEVEFVQDSNQTVSSKKPAPLPLFSAADIVQVVPAYSVGLG
PSWKDSHSEGLNRKAGSRINSMPNMGSCGRQVRDINHVDQSVTPPESLSHHTFDVGSLVE
VTSNTGITVYGVIQWMGVLSENKIEWAGIELDYEVNNCSDGTYGGQRYFTCKGGRALFLP
LTKCSPDGRFLCLRSEKETFKATNILPVTPLEETDENVPPIPESEALSLLVGKMKGIQGH
YNSCYLDATLFSLFSSSMTLDSVCHKPADTEQSISRSLRRDIVNCLRRQGFVPAESVMNF
RKQLGCDTFVTEEKDPEEFITILIQRVLCMEPLLKLRSNNNTSQDAYTFQIILDKEQVTQ
TPTVQQLLDTSFLSCGLKFEEIPSCLMVQMPRFGKKYKMFPHIIPSTELDITDLLYNSPR
ECFLCGRLAEYECPQCLQDRKLQPGRVKQYCTTCKTQVHTHPSRKGHCPRALAVPAEVPA
DAPLPRHTMQLFAVLCIHTSHYVSFVKYGPGPRSWLFFDSMADRCGDDHSGYNIPEIRAC
PEVGDFLSQSEEELVWADPSQAGEPVRRLLCDSYMCLYQSASMALYR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaaaaagagaagggaaggacaagttctttatagtgacacgggggaaggcgaga
aaagggttcgcaagaggatgtatcggccgtgtggaggcagagatgcagaagggagagctg
atgggactgttgtacggaggtggcagcagtgggggtaaccctaagagtgggggcatggtg
aagatggaggacacataccccctcacctgccaccaggcccagctgctgctcttcgtgtcc
ccctccagcaaacgcctggagctcctgtgtaacccccagctttttttggctatctgtgtg
ctgtctcaggatgacctggtggtagttaagcacaagaagggtcaccaaccagggctggtt
aggaacctaatgctgatcggtaagaaggagaaccaaggagacctgctgatgctgggcttt
gaggttgagtttgtgcaagactctaatcaaacagtgtcatctaagaagcccgcccctctt
cccctgttcagtgcagcagacattgtccaggttgtcccagcgtactctgtaggccttggc
cctagctggaaagacagtcattcagagggtcttaacagaaaagcggggtcacgtatcaac
tccatgcctaatatgggatcttgtggacgacaagtgagagatataaaccacgtagaccag
agtgtcaccccacccgaaagcctgtcacaccacacttttgatgtgggatccctggtggag
gtaacgtccaacactgggatcactgtatatggggtaatccagtggatgggagtcctttca
gaaaataaaattgagtgggcaggaattgagctggattatgaggtgaataattgctcagat
gggacgtatggaggccagcggtatttcacttgtaaagggggcagggccctatttttgccc
ctaacaaagtgcagtccagatggaaggttcctatgtctccgctctgaaaaggagaccttc
aaagccacaaatatcctcccagttactccattggaggaaaccgatgagaatgtccctcct
atccctgagtcggaagccttgtctttgctcgtgggcaagatgaaggggatccaggggcac
tacaactcctgctacctcgatgccactctcttcagtctgttcagctcatccatgaccctg
gacagtgtttgccacaaaccagctgacacagaacagagcatatctcgctctctgagaaga
gacatcgttaactgtttgcgccgacaaggttttgtccctgctgagagcgtaatgaacttc
cgcaagcaactcggctgtgacacctttgtaacagaagagaaagaccctgaagagttcatc
acaatcctcatacagcgggtgctgtgcatggagccattgcttaaactcagatcgaataac
aacacatctcaggatgcctacacattccagattattctggataaggagcaggtgacacag
actcccacggttcagcagctgctggatacctccttcctgtcttgtggcctcaagtttgag
gagatcccatcctgtcttatggtccagatgccaaggtttgggaaaaagtacaagatgttc
ccccacatcatcccttcaacagagcttgacatcacagatcttctgtacaactccccccga
gagtgcttcctctgtgggcgtttggcagagtatgagtgcccccagtgcctacaggaccgc
aagctccagccaggaagagtcaaacagtactgcactacttgcaaaacacaggtgcacact
catccgtctcggaagggccactgccctagagccctggcagtgccagcggaggttccggca
gatgcccctttacccaggcacacgatgcagttgttcgctgtgctctgcatccacaccagc
cactatgtgtcttttgtgaagtatgggcctggccctcgctcctggctcttcttcgacagc
atggcggacagatgtggtgatgaccacagtggctacaacattccagagatcagggcttgt
ccggaggtgggtgacttcctgtctcagtcagaggaggagctagtgtgggctgacccctcc
caggctggagagcctgtccgcaggctgctgtgtgactcctacatgtgtttgtaccagagc
gcatccatggccctctacagataa
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