Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369891
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Entry
139369891 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-4-like
KO
K06761
contactin 3/4/5/6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139369891
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
139369891
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Contactins
139369891
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
Others
139369891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
V-set_CD47
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
139369891
NCBI-ProteinID:
XP_070965274
LinkDB
All DBs
Position
17:66981108..67020155
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AA seq
1018 aa
AA seq
DB search
MLLPWELLILLSLKVCLAERNPRHGPVFSQEPSDSIFPLRFEDNKVFINCKAKGNPAPYY
KWKVDGREIDMDLNYNLVEGNLLINNPHATHHGGVYQCIANNTFGTIISREAKVQFAYLQ
NFSRKPRNTVSVREGQAVVLLCGPPPHNGEIKYSWVFNGRPSFLLQDTRRFVSQRTGNLY
IAKVEASDVGNYTCVVRNMMTNATVYSSPTPVELRRDAVMAEYEPKIEVQFPERLHVTKG
SSVKLECFALGNPVPAITWRRTDGNPLPGKMKINHSNGVLEIPYFRPEDAGAYECVAENY
RGKNIAKGQLIFQNVEHLHWVQTLKDAHMAIEANLQWECRASGKPKPVYRWLKNGEPLVL
EDRILLEGGRLAISRINLLDSGMYQCLAENEHGAIYASAELKVVASAPDFSKSLVKKSML
IQRGGEVIMECRPHASPRASISWRRGGEFLKDSRRRTIMEDGTLRITNISKSDGGRYTCV
ARNPFGTSSSTGTLVVKEPTKITVPPLSVDATVGQSIVLPCEVSRDSSLDPTFKWFFNGK
LIDFNKQDHFEMIGGESAGDLMVRNIQLKHSGKYVCMVHTVVDSVSAAADLIVRGPPGAP
EGLMVGEITDSSAQLSWGSGPDNHSPVTTYSIQARTPFSIGWQAVRTVPDSVPGQMFHAT
VIDLNPWVDYEFRVVASNNVGVGEPSMQSKQIRTKAAVPEVAPGNVSGGGGSRGELVIQW
EPIPEELQNGEEFGYIVAFRSLGTTTWKQTVLPSPDASRYTFRNDSIPPLSQFEVKVGVY
NNEGEGPSSHVVVVYSAEEEPSIAPSRVLARTLSASEIEVYWEPIPQTASSGKIIGYEVL
CWEEGVQESDAEMVKVTDTVALLSGLMGSTLYLISVRAQNSAGAGPSSPAVNVTTKKPPP
SQPPGNIEWNLTNSKIFLKWEHVKAMGNESEVTGYKVVYRQNWLGKSSVVETNRTSVELQ
VPSGEDYLIEIKVLSGGGDGSSSGPIRIPKMSSLNSKGHFSSTPMNICVVMFXLYFQG
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgccatgggaactgttaatccttctgtcactcaaggtctgccttgctgagaga
aaccctcgccatggacccgtcttcagtcaagaaccaagtgacagcattttccccttgagg
tttgaggacaacaaggtgttcatcaattgtaaagcaaaggggaacccagccccatattat
aaatggaaggttgatgggagagagattgacatggatttgaactataacctggttgaagga
aacctgttgatcaataaccctcatgcaacacatcatgggggggtttaccagtgtatcgct
aacaatacctttggaaccatcatcagcagggaggccaaggtgcagtttgcatatctacag
aatttcagcagaaagcccaggaacacagtgtcagtgagagaaggccaggcagtggtgcta
ctgtgtggccctccaccccataatggagagatcaaatactcgtgggttttcaacggacgc
ccaagtttcctgctgcaggatacccgccgcttcgtctcccagaggacaggcaacctgtac
atagccaaagtggaggcctccgatgtggggaactacacgtgtgtggtgaggaacatgatg
accaacgccaccgtttacagctcgcccacccccgtggagctgcgcagggacgctgtaatg
gcagagtatgagccaaagatcgaagttcagttcccagaaagacttcatgtcaccaaagga
tcatcagtgaaactggaatgcttcgccttaggaaacccagtgcctgccatcacatggagg
agaacagatgggaatcccctccctggcaagatgaaaatcaaccattccaatggggtcctg
gaaataccatatttcagaccggaggatgctggtgcatatgagtgtgttgcagagaactac
agaggaaaaaacatcgccaaggggcaactcatattccagaatgttgaacatctgcactgg
gtccagacgttaaaagatgctcatatggctatcgaggctaatcttcagtgggagtgtagg
gcgagcggtaaacctaaacctgtgtacagatggctgaagaacggggagcccctggtgttg
gaggacaggatacttttagaaggtggacgattggcaatatccaggatcaacctgttggac
tctgggatgtaccagtgcctggcagagaacgaacatggagccatctatgccagtgctgaa
ctcaaggttgtagcctctgcacctgacttctccaagagtcttgtgaagaagtccatgctg
atccagagagggggggaggtgataatggagtgccgtccccatgcgtccccaagggcctcc
atctcctggcggagagggggagagtttctgaaggacagcaggagacggactattatggag
gatggaactctccgtatcaccaacatcagcaaatcagacggagggaggtacacctgtgtg
gccaggaacccctttgggacatcaagcagtactggtactctggtggtgaaagagccaacc
aagataacggttccaccactgagtgtggatgccactgtgggacagagcatcgtgttgcca
tgtgaagtgtcccgagactcctccctggatcccacctttaagtggttcttcaacggcaaa
ctcattgattttaacaaacaggaccactttgagatgataggaggggaatcagctggtgat
ctgatggtcaggaatattcagctaaagcattctgggaagtatgtgtgcatggttcacacc
gtggtggacagtgtctcagcagcagccgacctcattgtcagaggaccacccggtgcccca
gagggcctcatggtgggggagatcactgactccagtgcccagctctcctgggggtctggg
ccagacaaccacagccctgtcaccacatacagcatccaggccaggacccccttctccatc
ggctggcaggccgtcaggacagttcctgattctgtgcctggacagatgtttcatgcaacg
gtgatagatttaaacccctgggtggattatgaattcagggtggtggctagcaacaatgtg
ggtgttggagagcccagcatgcaatccaagcagattcgaacaaaagcagcagttcctgaa
gtagcaccgggtaatgtgagtggaggaggaggtagccgaggagaactggttatccaatgg
gagccgataccagaggaactacagaatggagaggaatttggatatattgtggcttttcgt
tctcttggtacaaccacgtggaaacagactgtgctgccttcacctgatgcatcaagatac
accttcaggaacgacagcatccctcccctctcccaatttgaggtgaaagttggagtctac
aacaacgaaggagaaggcccatctagccatgtggttgtagtgtattctgcagaggaagag
ccctctatagctccgtccagagtgttggcccggacgctatcagcctctgaaatcgaggtg
tactgggaacccatcccccagacagccagcagtgggaagatcattggatatgaggtgctt
tgttgggaggagggggtgcaggagagtgatgctgagatggtgaaggtcacggatactgtg
gcccttctctctggactcatgggaagtacgttgtatctgatctcagtcagggcccagaac
agtgctggagcagggccttctagccctgcagtcaatgtcaccaccaagaaaccaccacca
agtcaacctccagggaatattgaatggaacttgaccaactccaagatctttttaaagtgg
gagcatgtcaaggcaatgggaaatgagtctgaggtgacaggatacaaggtggtgtaccgt
cagaactggcttggaaagagcagcgtggtggagaccaacaggaccagtgtggagctgcaa
gtcccctctggcgaggactacctcattgagatcaaagtcttgagtggtggaggtgatggc
agcagcagtggccccatcaggataccaaagatgtccagtcttaactcaaagggccatttc
agctcaactccaatgaacatttgtgtagttatgtttnntttatactttcaaggttaa
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