Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369905
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Entry
139369905 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139369905
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139369905
04261 Adrenergic signaling in cardiomyocytes
139369905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139369905
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139369905
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
dCache_1
VWA_3
VWA
VWA_2
CobT_C
dCache_2
Zn_ribbon_5
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
139369905
NCBI-ProteinID:
XP_070965290
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Position
2:54171930..54273652
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AA seq
1260 aa
AA seq
DB search
MSSSGDTVGPGRMGLLPRADTVDPYRMGLLPRAETVGSGRMGLGPRADTVGPGRMGLGPR
ADTVDPGRMGLGPRADTVGPGRMGLGPRADTVGPGRMELGPKADTVDPGRMKLGPRADTV
DPYGMGLGPRADTVDPYRMGLGPRADTVDPYRMGLGPRAEPGGVTNRLGPRGTPAGLRLG
LWILCFSWFCFTAHAQMKIPPETVQDWANALSVQLREATTRYSGANILQKKFRDVESIIK
IVDIDGRAQVRDFSEDIERMLGSKMKSVKRLAESAEDADLYHEFNKTLQFDYYNSMLVNT
MDDDGNFIELGGEFPLEENEHFNNIPVNTMQSDVQVPTNVYNKDPYILNGIYMSEALNDV
FANNFKKDPTLTWQYFGSSSGFFRIYPGIKWTPDSNGVAAFDCRNRNWYIQAATSPKDII
IVVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTDYVRYVEPCFQGTLVQADLD
NREHFKVLVDDLHVKGEGKVAKAMKESFKILNEAATKGQGSLCNQAIMLITDGAMEDFKD
VFEEFNWPDRRVRLFTYLIGREMTFADNTKWIACNNKGYYTHISTLADVQENVMEYLHVL
SRPMVINHNHDIIWTEAYMDSVLFATKAQSLLLMTSVAMPVFSKKKETLSHGILLGVVGS
DIPLLEVMKLAPRYRLGPHGYAFLITNNGYILAHPDLRPLYKDGKKLKPKPNYNSVDLAE
VEWEDIDETLRTAMVKGETGTLSLNVRASVDKAKRPMFLTNDYFYTTINDTPFSFGMVLT
RGHGQLMFMGTVSVEEGLHDLTSPDLSIAAEWTYCETDIDPHHRKYSQLQAVIRYLQGKE
PDLECDEVLLQQTLFDAVVTAPLEAYWQAIMLNASGTEAGVETAFLGTRSGIIRLTRYTG
METRVAKKFLTPADKDNLFTMDHFPLWYRLAMENPPGRFLYYMPVEDNDNKDKTGASKYV
IAVTAVTVSSGGKTAMAGAIGVQMSLEMLEKRLWAITFQPNDTDCTEVEGVCPLTCQSID
VNCFLVDSNGFIIVSKERSEVGRFFGEVDGSVMTALITSGMFKQVSLYDYQGMCRSGHSH
SSSARPLLSPFYGLAAVIKWFFSHMLMFLMEFNFCGLWHSDYIVDAHKAKKVDALQPCDT
EYPGFVYDSSIRETNSLIKCGRCQKMFVVQAVPESNLVLMVVQADCDCSRQYSSITLEPK
EVKYNASVKCNRMKSQKVRRRPNSCHAYHPKENAKDCGGASEISLSVAVFLTSLATSLAL
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcaggcgacacagtgggcccaggcaggatgggactactacccagggctgac
acagtggacccttacaggatgggactactacccagggctgagacagtgggctcaggcagg
atgggactaggacccagggctgacactgtgggtccaggcaggatgggactaggacccagg
gctgacacagtggacccaggcaggatgggactaggacccagggctgacacagtgggccca
ggcaggatgggactaggacccagggctgacacagtgggcccaggcaggatggaactagga
cccaaggctgacacagtggacccaggcaggatgaaactaggacccagggctgacacagtg
gacccttacgggatgggactaggacccagggctgacacagtggacccttacaggatggga
ctaggacccagggctgacacagtggacccttacaggatgggactaggacccagggccgag
ccaggtggagtaacaaacaggctgggacccagagggactccagcggggctgaggctgggc
ctgtggatcctgtgtttcagctggttctgcttcactgctcacgctcagatgaagatacca
cctgagacggtccaagattgggcaaatgccctttcagtgcaactacgcgaggctaccaca
agatattcgggagctaacattctgcaaaagaaattcagagatgtagagtccattatcaag
atagtggacatcgatgggagagcccaagtgagggacttttcagaggacatagagagaatg
ctggggtccaagatgaagtctgttaagcggttggctgagtctgcggaggatgcagatttg
taccacgagttcaacaaaactctacagtttgactactataactccatgctggtgaacaca
atggatgacgatggtaacttcatagagctaggtggggagtttcccctggaggagaatgag
catttcaacaacatcccagtcaacacaatgcagagtgacgtacaggtccccaccaatgtc
tacaacaaagatccctacatcctcaatggaatctacatgtcggaagctttgaatgacgtg
ttcgccaacaacttcaagaaagaccccaccctcacctggcagtactttggcagctcctcg
ggtttcttcagaatctaccctggtatcaaatggactccagattcaaatggtgtggctgct
tttgactgcaggaaccgtaactggtatattcaggctgccacctcaccaaaggacattatc
attgtggtggacatcagtggcagtatgaaaggcttgaagatgaccattgccaaacacacc
atcaacaccatcctggacacgctgggggagaacgactttgtcaacgtcattgcttacact
gactacgtgcgctacgtagagccctgcttccaaggcactctggtgcaagctgatttggac
aaccgtgagcattttaaggtgctggtggacgacctgcatgtgaagggagagggtaaagtt
gcgaaggccatgaaggaatcgttcaaaatcttgaacgaggcagcgaccaagggccaaggc
agcctgtgcaaccaggccatcatgctgatcacagatggagccatggaggacttcaaggac
gtgtttgaagagttcaactggcctgatcgcagggtgcggctcttcacttaccttataggc
agagagatgacctttgcagacaacaccaagtggatagcctgcaacaataagggttactac
acacacatctccactctggctgacgtacaggagaatgtcatggagtaccttcatgtcttg
agtcgaccaatggtcatcaatcacaatcatgacatcatctggacagaggcctacatggac
tctgtgctctttgccacaaaggctcaaagtttacttctcatgacctccgtggcaatgcct
gtcttcagcaagaagaaagagacgctgtcccatgggattctgctgggtgtggtgggttct
gacatccccctgctggaggtcatgaagctggctcccagatataggctgggtccacatggt
tacgccttcctcatcaccaacaacggttacatcctggcacaccctgacctgcgacctctt
tataaagatggtaagaagctgaagcccaagcccaactacaacagtgtggacctggctgag
gtggagtgggaggacatagatgagacactaaggacagccatggtgaaaggggagacaggc
actctgtccttaaatgtgagagcatcagtggacaaagcgaaaaggcctatgttcttaaca
aatgactatttctacacaaccatcaacgacaccccattcagttttggtatggtgctgacc
aggggtcacggacagctgatgttcatggggacggtctctgtggaagagggcctgcatgac
ctgacgtcccctgatctatccatagccgctgagtggacatactgtgagacagacattgac
cctcaccaccgcaaatactctcagctccaggctgtcattcgctacctgcaggggaaggag
cctgacctggagtgtgacgaggtgctgctgcagcagaccctgtttgatgctgtggtgaca
gcccccttagaagcctactggcaggcaataatgctcaatgcatctgggacggaggcgggt
gtggagacagccttcctgggaactcgctctggcatcatccggctgaccagatacaccggc
atggagaccagggtcgccaagaagttcctgactccagcggataaggacaacctgttcacc
atggaccacttccccctgtggtaccgtctggccatggagaaccctcccggaagattcctc
tactacatgccggtggaggacaacgacaacaaagacaagacaggggcgtcgaagtatgtc
atagctgtcacagctgtgactgtatcatcgggaggcaagacagccatggctggagccatc
ggggtgcagatgtccttggaaatgctggagaagaggctatgggccattacctttcagccc
aatgacacagactgtactgaagtggaaggtgtctgccctctcacctgtcaaagcattgat
gtcaactgtttccttgtggacagcaacggtttcatcatagtctcgaaagagaggtcagag
gttggacgtttctttggggaagtggatgggtctgtgatgacagcgttgatcacgtcaggc
atgttcaagcaggtgtcgctgtatgactaccagggtatgtgtagatcaggacacagtcat
tccagtagtgctcggcctctgctcagtcctttctacggccttgcggcagtgatcaaatgg
tttttttctcacatgttgatgttcttaatggagttcaacttctgtgggttgtggcactcg
gattacattgtagacgcccataaagccaagaaggttgacgcgctgcagccgtgtgacaca
gagtatcctggcttcgtgtacgattcctccatcagagaaaccaacagcctcatcaaatgt
ggccgttgtcagaagatgtttgtggtgcaggcggttcctgaaagtaacctggtgttgatg
gtggtccaggcggactgtgactgctcccggcagtactcctccatcaccctggagcccaag
gaggtcaaatacaacgcatcagtcaagtgtaacaggatgaaatctcagaaagtccgccgg
cgcccaaactcctgtcacgcctatcatcctaaggaaaatgccaaggactgtggaggagct
tcagagatcagcctatcggtggccgtcttcttgacttctctggccacttcattggccctc
tga
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