KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370012
Entry
139370012         CDS       T10872                                 
Name
(RefSeq) nondiscriminating glutamyl-tRNA synthetase EARS2, mitochondrial isoform X1
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00860  Porphyrin metabolism
ocla00970  Aminoacyl-tRNA biosynthesis
ocla01100  Metabolic pathways
ocla01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    139370012
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    139370012
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ocla01007]
    139370012
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocla03016]
    139370012
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ocla02048]
    139370012
Enzymes [BR:ocla01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     139370012
Amino acid related enzymes [BR:ocla01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   139370012
Transfer RNA biogenesis [BR:ocla03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    139370012
 Prokaryotic type
   Other AARSs
    139370012
Prokaryotic defense system [BR:ocla02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    139370012
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2 TetR_C_7
Other DBs
NCBI-GeneID: 139370012
NCBI-ProteinID: XP_070965396
LinkDB
Position
17:complement(1216700..1231058)
AA seq 576 aa
MLLSSFIHCSTPSRCLPVKTCARCCQYSTGRSVRILGTPVLLKNALTFNRSGGHGGKQQY
MRLKSAQKRCFSSECDEVGRQHEHGDVRVRFAPSPTGFLHLGGLRTALYNYIYAKKYGGS
FILRMEDTDQSRLVPGAAESIEDMLEWAGIPPDESPRGGGQYGPYLQSQRLSLYSQAADS
LVQTGKAYHCFCSQQRLELLKREALRSGQTPRYDNRCRHLRPDQLEEKLDQKVPHVIRFR
LESGVEPFNDLVFGWNRHEVAQVEGDPVVLKADGFPTYHLANVVDDHLMEVSHVLRGSEW
LISTSKHLLLYRALGWKPPVFGHLPLLLNRDGSKLSKRQGDIYIQSFQRSGALPEALLDI
TTHCGSGFNSNRVGRKMEELIAEFNPSKITTHSALLDLDKLPEFNKIHLQQRIDDAVQRD
WLVRDLQGRIQEVYGTQVQDQDVLQPDYITRVLHLRKGHISSVSDLVSSEYSYLWVRPSF
SDQQMTALSSETQHIATLVIRLMEGLKGGEELTVDQLSVELKTLAKKTSNTKYRDVMKII
RLALSGLQQGPSVAEMMVSLGPSEITHRFNRVLQQH
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgctcctgtcatcgtttatacattgcagcacaccatccagatgccttccagtaaaaacg
tgtgcgcggtgttgccaatacagtacaggaaggagcgtccgtatactcggtaccccagtg
ttgctgaagaacgcattgactttcaaccgcagtggtggacacggcggaaagcagcaatac
atgaggttgaagagcgcgcagaagagatgcttttcatctgaatgtgacgaggttggtcgt
cagcatgaacatggggatgttagagtaaggttcgctccgagtccaacaggtttcctacac
ctggggggactgcgtacagctctctacaactatatctacgctaagaagtatggagggagc
ttcatcttacgcatggaagatacagaccagagcagactggtgccgggagctgcagagtct
atagaggatatgttggagtgggctggtatccccccagacgagagtccccgtggaggaggc
cagtacggtccctacctccagtcccagaggctgtccctgtacagccaggctgctgactcc
ctggtccagacagggaaggcctaccactgcttctgcagccagcagagactagaattactg
aagagagaggccctacgcagcggacaaacaccgcggtatgacaacaggtgcagacacctc
cgcccagaccagctggaggagaagctggatcagaaggtcccccatgtgatcaggttccga
ctggagtctggggtagaacccttcaacgacctggtcttcggatggaaccgtcatgaggtg
gcccaggttgaaggagaccctgtcgtgttgaaagcagatggtttccccacctatcacctg
gctaatgtagtagacgaccacctgatggaggtcagccacgtcctgagaggatcagagtgg
ctcatctctacctccaaacacctgctgctgtacagggctctgggctggaagcccccggtg
ttcggacaccttcctctcctcctcaacagagatggcagtaagctctccaagagacaagga
gatatctacatacagagtttccagaggagtggggccctacctgaagcactactggatatc
accacacactgtggatctggcttcaacagtaaccgtgtcggtcgtaagatggaggaactg
atcgctgagttcaacccgtccaagatcaccacccactctgccctgctagacctggacaaa
ctacctgagtttaacaaaatccacctgcagcagcgtatcgatgacgcggtgcaacgcgat
tggctggtgagggatctgcaggggcggatccaggaagtgtacgggacacaggtccaggat
caggatgttctgcaaccagattacatcacacgggttctacacctgcgcaagggtcatatc
tcctctgtgtctgacctggtgtcctcagagtattcctacctttgggttcgaccttctttc
tctgaccaacagatgacagcactcagctcagagacacaacacatcgctactctggtcata
cggttgatggaaggtctgaaaggaggtgaggaactgacagtcgaccagctcagtgtagaa
ctgaagactctggctaagaagaccagcaacactaaatacagagacgttatgaagattata
cgactggccctcagcggactacagcaaggccccagtgtagcggagatgatggtatcgttg
gggcccagtgagatcacacatcgcttcaacagagttctacagcagcactga

DBGET integrated database retrieval system