Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370053
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Entry
139370053 CDS
T10872
Name
(RefSeq) BRCA1-associated ATM activator 1-like
KO
K23112
BRCA1-associated ATM activator 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139370053
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SSDB
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139370053
NCBI-ProteinID:
XP_070965462
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Position
17:complement(4096953..4116247)
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AA seq
1007 aa
AA seq
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MDSECLVLLPRVCAVLADPRQSLPDDTSLEKLLDWFTGLTKEDHGLALLESCPCLVDYIS
TACLDKTTDPSMLSFSLKLSGLLAASQHGFNLLQDRSILGVAYDSERWQVAGLWEDPSVR
IGWIHGLSNMMRHTQAFHFLDQAGLTEPLLQLQTDPSLFVASAANHLLARLLTFRQPTTT
SHTTQGNGLTVPPNKEEVELDVTMETSPGSGCSITMEILKHLESSLESDSHTQVLQGLRL
LALTLPELEAPLRGSVIRRVLRPLEGLVREGRRAVAQPLMDVLLATCRSGPCDSRLVSLM
ASMLNSQNPSDAALCAAATLHPETCPPGLRQKVVAVLLGPLQMVTGVTLLGKPNDRHTDG
QTDHRHTDQQTDLRHTDQQTDHRQTDEDHRQTDEDHRQTDEDHRQTDEDHRQTDTDQDRQ
TECRSSLSLLLDHLNHKPSCVSLLCVSVSSAPYITDMESSASVILAVVSLLRICNGHSPS
PESKAAIGCSKASTNLIGCSKVQRCCLDSLASLSTCPGAVERVVEVFHVLVQNLQNPDSD
PTVLQKNYQAMLRWLCVSAEPNSLADLVTEDLLPVLKKRVCDVRWEVRDSTLEFLGQLCE
ALSCTVTPILLEALCDQESYVRASAISALARTLPLSDQQGEPGNQTQEQTLGQLLDILSQ
DSEGFPRRAVVQFFISWLKTHPSSSSSSSLCSVLSLGSTDLDWEVKVHTLELVELLMEET
LPGHQESELGSAPPPYGGSGGTNLLTHTDLTHPYAVTPSQPSPLLTHTPTDLTHTYAVTP
SQPSPLLTHTPTDTHTPPTHTHPTHTHPTDTHTSPTHTHPTTSVVCGLSRLVELGVATAL
LNGLFDCDRPVALKACSLLLRLRDAVCPSRSLGKGAMTTDDATVATVTFDLRGQVWEREV
TRKLQEKRGSDWVKESREVGCDRPNKNRDSERTDGAGSEARDRSTGKSVCEGSARVCEVL
WSLGLEERQSVLSQSSDHVQNSPLSLLEDILNATDTSHTDEVIVDCY
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagtgcctggtgttgttgcctcgggtgtgcgctgtactagcggaccccaga
cagtccctaccagacgacaccagcctcgagaaactgctggactggttcactggtctcacc
aaggaggaccatggcctggccctgttggagtcctgcccctgtctggtggactacatatcc
accgcgtgtctggacaaaactacagatcccagcatgctttccttcagcctcaagctttcc
ggcctgctggcggccagccaacacggcttcaacctgctgcaggatcgatccatcctgggc
gtggcctacgacagcgagcgatggcaggtggctggcctatgggaggatccgagcgtgcgg
attggctggatccatggcctgagtaacatgatgcgccacacacaggccttccacttcctg
gatcaggctggcctgaccgaacccctcctccagctacagactgaccccagcctattcgtc
gcctcggccgcaaatcacctcctggcccgcctcctaaccttccgccagccaaccacaacc
tcacacacaacccaggggaatggcctcactgttccacccaataaggaagaggtagaattg
gacgtaaccatggagacaagtccaggaagcgggtgttccatcaccatggagatcttgaag
cacctggagagctctctggagtcagacagccacacccaggtgctccaggggctgaggctg
ctggccctgactctccccgagctggaggctcctctccggggctcggtgatcaggcgagtc
ctgaggcctctggaggggttggtccgagaaggccgcagagcagtcgcgcagcctctaatg
gacgtcctgctggctacatgcaggtccggtccgtgtgactccagactcgtctctctgatg
gcgtccatgttgaactcccagaatccctctgacgctgctctgtgtgccgccgccaccctc
catccggagacctgtcctccaggcctcagacagaaggtcgtagctgttctactgggacct
ctacagatggttactggagtaactctgctgggcaagcccaatgacagacacactgatgga
cagactgaccacagacacactgatcaacagactgacctcagacacactgatcaacagacc
gaccacagacagactgatgaagaccacagacagactgatgaagaccacagacagactgat
gaagaccacagacagactgatgaagaccacagacagaccgacactgaccaggacagacag
acggagtgtcgtagctctctctctctcctgctggatcatctcaatcacaaaccctcctgt
gtctctctgctctgcgtctccgtgtccagcgctccctacataacagacatggagtcatct
gcctccgtcatccttgctgtggtgtcactcctgaggatctgtaacggccactccccctca
cccgagagcaaggctgctatcggctgtagcaaagcatccaccaacctgattggctgcagc
aaggtccagaggtgttgcctagactccctggctagccttagcacctgccctggagccgtg
gaacgggtggtggaggtgttccatgttctagtgcagaacctacagaaccctgactcagac
cccaccgtgctccagaagaactaccaggccatgttgaggtggctttgtgtgtctgcagag
cctaactcactggctgatctggtcactgaagacctcctgcccgtgctaaagaagcgcgtg
tgtgacgtgcgttgggaggttcgagactccactctggagttcctcggccagctgtgtgag
gcgttaagctgcaccgtcactcctatcctgctggaggcgctgtgtgatcaggagagctat
gtgagggctagtgccatctctgccctggccaggacactcccactcagtgaccagcagggg
gagccagggaaccagacacaggagcagaccctgggtcagttactagacatcctgtctcag
gattcagagggcttccccagacgtgctgttgtccagttcttcatcagctggctaaagaca
cacccatcatcttcctcctcctcctcgctgtgttctgtcctatcgctgggcagcactgat
ctggactgggaggtcaaagttcacaccctggagctggttgagctcctgatggaggaaaca
cttccaggtcaccaggagtcagagctggggtcagctcctcccccttacggtggctctgga
gggacaaacctactaacacacactgacctcacacacccctacgctgtgacgccaagccag
ccctcaccccttctaacacacaccccaactgacctcacacacacctacgctgtgacgcca
agccagccctcaccccttctaacacacaccccaactgacacacacacaccccccacacac
acacaccccacacacacacacccaactgacacacacacgtcccccacacacacacaccca
actacatctgtagtgtgtggtctgtctcggttggtggagctcggcgttgcaacagcgttg
ctcaacggcctgtttgattgcgacagacctgtagctttaaaagcctgtagtctgttgcta
cgactacgagacgcggtgtgtccgtcccggtcgctagggaaaggtgctatgacaactgac
gacgcaacagttgccacggtgacttttgatctgaggggtcaggtttgggagcgggaggtc
acgaggaagttacaggagaagagaggatctgattgggttaaagagtccagggaagtaggt
tgtgataggccgaacaagaacagagattctgaaaggacagacggggctggctccgaagcc
cgcgataggtcgacggggaagagtgtgtgtgagggtagcgcgagggtgtgtgaggtgctg
tggtcgttgggtctagaggagaggcagagtgtgttatcacagagtagtgaccatgtccag
aactcacccctctctctactggaggacatcctgaacgctacagacacctcacacactgac
gaggttatagtagactgttactga
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