KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370129
Entry
139370129         CDS       T10872                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144  Endocytosis
ocla04517  IgSF CAM signaling
ocla04530  Tight junction
ocla04810  Regulation of actin cytoskeleton
ocla05100  Bacterial invasion of epithelial cells
ocla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    139370129
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139370129
  09144 Cellular community - eukaryotes
   04530 Tight junction
    139370129
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    139370129
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139370129
   05100 Bacterial invasion of epithelial cells
    139370129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139370129
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocla04812]
    139370129
Membrane trafficking [BR:ocla04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    139370129
Cytoskeleton proteins [BR:ocla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     139370129
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_Aladin Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st eIF2A PEP5_VPS11_N Rax2 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st EIF3I WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 139370129
NCBI-ProteinID: XP_070965554
LinkDB
Position
17:4400101..4416470
AA seq 381 aa
MSYHSFLLEPISCHSWNKDRTQIALCPNNHDVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWSLKGEVWKPTLVILRINRAARCVSWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTVWGSKMPFGEVLFESGPSGVSGGAGDGAGGGWVHGVCFSHSGNRLAWTSHDSTVAIA
EGGKTSTISSLSSETLPLLCVSFITENSLVAAGHDCYPVLFVYDGTKGSVTFGGKLDVPK
QTSQRGISARERFQNLDRRATSSETTEQGLESLHKNSISQISVLEGGKSKCSTFCTTGMD
GGMVTWDVKSLESALKDLKIV
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcttaccacagcttcttgctcgagccaatcagctgccactcctggaacaaggaccgg
acccagattgctctgtgtcccaacaaccatgatgtccacatctataagaaggacgggacc
aagtggaccaagattcatgaactgaaggagcacaacggacaggtcacaggtatagactgg
gctccagagagtaaccgtatcgtgacctgtgggacagatcgtaacgcgtatgtctggtct
ctgaagggggaggtgtggaagcccaccctggtcatcctccgtatcaaccgggctgctcgc
tgtgtcagctggtctcccaaggagaacaagttcgctgtgggcagcggatcacgcctcata
tccatctgctactttgaacaggagaatgactggtgggtctgtaagcacatcaagaagccg
atccgttccaccgtcctcagtctggactggcatcctaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctcagcctacatcaaggaggtggaggagaagccc
ggacccacagtgtgggggtccaagatgccctttggagaggtgctgtttgagtctgggccc
tcaggggtgtctgggggggctggagatggggcaggagggggatgggtccacggggtctgt
ttctcccacagcgggaaccgcctggcctggacgtcacatgactcgactgtggcgatcgca
gagggaggcaagaccagcacgatcagtagtctgagctctgagacccttcctctgctgtgt
gtcagctttatcactgagaacagcctggtggccgctggtcatgactgctacccggtgctg
tttgtgtatgacggtactaagggctcagtaacgttcggagggaagctggacgttcccaag
cagacgtctcagagagggatcagcgccagggaacgcttccagaacctggaccgccgagcc
acctcgtccgagaccaccgagcagggcctggagagtctgcacaagaacagcatcagtcag
atctctgtgctggaaggagggaagagtaaatgttccacgttctgtaccactgggatggac
ggaggaatggtcacatgggacgtcaagagtctggagtctgccctgaaggatctcaagata
gtctga

DBGET integrated database retrieval system