Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370173
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Entry
139370173 CDS
T10872
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139370173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139370173
04090 CD molecules [BR:
ocla04090
]
139370173
04091 Lectins [BR:
ocla04091
]
139370173
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
SIGLEC family
139370173
CD molecules [BR:
ocla04090
]
Proteins
139370173
Lectins [BR:
ocla04091
]
I-type lectins (Siglecs)
139370173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
Ig_CD22
V-set
I-set
Ig_5
Ig_4
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
139370173
NCBI-ProteinID:
XP_070965603
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All DBs
Position
17:8146700..8151128
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AA seq
580 aa
AA seq
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MALRTAGSVLVVFLWSVTVVLGQKGWSVTYTTQSICTLKGSSVDLFCSYTYPRGTVTTTL
WFTKMEAGKEPKDLGQDPEYAGRLEYHGVKKKDCTLKITDLRERDSATYKFRFITDQEGG
KYYGDPGVTLSVTALQVKITSKTWQNRVTLTCSTTCTLTDNPTYIWYKNGHKVKEDTSSL
YSDYFSDADSYSCAVKGHEDRHSPAVCVQGQSCNRVTYTKRRICVLKGSTVDISCTYVSY
YSTTSSFWFRSDKSTPEDLTTDPGYAGRVEYPGTYRGPSSLRITDLREEDSAEYRFTFKT
DNFEWGHSFPGTTLSVTGLQVKVTPAAEGQKTLTCITTCTLTDNPTYIWYKNGQRLDEPT
SQQYSSNILVVLGHSADSYSCTVEHHEDLHSPAVYAPKNTSVSVSPSGEIVEGSSVTLTC
SSNANPPVDKYTWYKKNVTSPKASGQSYSITNIISEDRGEYYCEAQNGRGSMNSTALMII
VAGKQTSVVTAAVGIIVVVPVLILCLSGLMWFRRFTGGSDATTDTQSVRPDSNSDTYTGL
NMRTMSPDYDTLASVNPDPNSDPNSDMYTPLNMKTSSPEM
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccttgagaacagcaggaagtgtgttggtggtctttctctggtctgtgacagtggta
ctgggtcagaaaggatggagtgttacatacaccactcagagtatctgtaccttgaagggg
tcatcagtggatctgttctgctcttacacatatcccagaggtacagtcacaacaacactc
tggttcactaaaatggaggctggtaaagaacctaaagatctaggtcaggacccagagtat
gcaggtcgtctggagtatcatggggttaagaagaaagactgtaccctgaaaatcacagac
ctgagagagagagactcagctacgtacaagttcagattcataacagatcaggaaggaggg
aaatattatggagatcctggagtcactctgtctgtaacagctctgcaggtgaagataact
tctaaaacttggcaaaatagggtgacactgacctgtagcaccacctgtactctgactgac
aaccccacctacatctggtacaagaacggacacaaagtaaaggaggacacctccagcctg
tactcagactactttagtgatgcagacagttactcctgtgctgtaaaaggccacgaggat
cgccactctcctgcagtgtgtgttcagggtcagagctgcaacagagtgacttacaccaag
aggagaatctgtgtcttgaaggggtcaacagtggacatatcctgtacttatgttagttat
tattccaccacatcatcattctggtttagaagtgataagtcgacccctgaagacctaacc
acagacccagggtatgcaggtcgtgtggagtaccctggaacatacagaggtccctcctcc
ctgagaatcacagatctgagagaggaggactcagctgagtatcgcttcacttttaaaaca
gacaactttgaatggggtcatagtttcccaggaacaactctgtctgtcacaggtctgcag
gtgaaggtgactcctgctgcagagggacagaagacactgacctgtatcaccacctgtact
ctgactgacaaccccacctacatctggtacaagaacggacaacgtctagatgagcccact
tcccaacaatactctagtaatatcctagtagtgttgggtcattctgcagacagttactcc
tgtactgtagaacaccatgaggacctccactctcctgcagtgtatgctccaaagaacacc
tcagtgtcagtcagtccctctggtgaaatagtggagggcagttcagtgactctgacctgc
agcagtaatgccaacccacctgtggacaaatacacctggtacaagaagaacgtaacctca
ccaaaagcatcaggacagagttacagcatcactaacatcatctctgaggacagaggagaa
tattactgtgaggcccagaatggaagaggatctatgaactctacagctctgatgatcatt
gtagcagggaaacagacctcagttgtgactgcagctgtaggaatcatagtggttgttcca
gttctcatcctctgtctctctggactcatgtggttcaggagattcacaggaggaagtgat
gcgacaacagacacacagagtgtccgtcctgactctaacagtgacacgtacacaggtctg
aacatgaggaccatgtcccctgactatgacactctggcaagtgtcaatcctgaccctaac
agtgaccccaacagtgacatgtacacacctctgaacatgaagaccagttcaccagaaatg
tga
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