Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370191
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Entry
139370191 CDS
T10872
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139370191
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
139370191
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
139370191
NCBI-ProteinID:
XP_070965631
LinkDB
All DBs
Position
17:8442853..8460862
Genome browser
AA seq
1430 aa
AA seq
DB search
MATLLAIAERSHVRICKMAAQWRGKDELIITGNTEFLTANTFNEAVLGKGEVSDLEMDTH
SCLDPSILAMFEDSAVAAETGSRLDEESESTLLTALTEILDSVDDETLSPFDTLPDTGLF
SDQRLRDNSPLRRLLSLTRSPPDKEALFHSIKTPSSSSSPSSSVGKVETVIPDRPWRARL
TPRAQGSSTSTQRSDGEEEGGKVHIHSPPQGFNLTNQDSGELFLDRSEVRALNSVEKDHG
YSSTVSLVDLVKLMHPYCLRVCLDEEGKDWVGTSRQEASSLGERSADQSVPLEGEVWRYA
KPGSEESDEEIDVDGSDDECPSVGGMKDEKEGDGEQGSKGEEVKQLKSLLVKWDGPKEGQ
KTKNKKRVTFGPVLVTSYELPAADEPDLNTLPDLCELTSQIPIFDFNTKTTTISLTTSSP
ESSAASSKDNHHQVVTDLSERTGDTSSSQPPPQRGESKPRPALSLQQYRLLRQQRLPLVG
KPENYTTKWPSLPETPTELPPIPYLQGPKYSMWGPTTTHPTHHYIGSKTGGDVSGFKPIS
KTRTKMVSPACPSKPGKAIGINGSKPVRSGTKTPPTSSALKPKRNSMEATSANDVGVLKP
IWTETISPASPLPSPNLNSNSVAGLGQNRTSPEKSAVAVSSDPPNPVLVPLPGTRPSLDG
FDRSRGTNQEKQEQSLPRSTTQESPAPKPKMVFCNRDPSLKSTSLLLEIQRRFSTKQPSR
KALHTQNTAETTKQGDQPRSLSPRKGIETVPEGSKFSPSAPVMASPSSSPSVHPPTHAVT
PYPEMERAKRVALGNLPHVRLSTSPESNTCIQTPTCGTGIQATDLTSLLERFEETQAKEE
TERESESSPDRSPVRDEEPSNNTEGMLTLLGAYLLSTQDKLCLPAPTGFPELVNTLEPLR
TPEPLRTPEPLRTPEPLRTPEPLRTPGPLRTPEPLRTPEPLRTPEPLRTPGPLRTPEPLR
TPEPLRTLERCDTQEPLSTQNVLSTQEQAPAQPRWKPLTPVAPQRKQPATPKPLPHKAIQ
IINPRPLPPKKAHPLPPKPPVTPPEFQTPVSVSSDHDYCLSQDQPGSNTTMLCSKRQTIL
PDHQPIPNPSSVPGTQNSGKYLRQQQPVDSRTVPETQLPSDSAPPSTESSPSRTDAITAG
ETQAERTSPCIPSPPSPSPPARGRRSSRRYRTRSSCSDSSSRSPSSSSSSSSSSSRSRSR
SPPRKRFCPRRSESSSSSSSSCSSSVSRSPVPCRYRLPYPQSWNRSRSTSKSWTQSGSRS
RSRSPTTLAYSRTQRWRDCYSSNNVRDSRKRKRQQDMRNQKLKAIDERRVVYVGRIQRTM
MHAELRERFSLFGEVEECTLHFRDRGDHYGFVTFYNMKDAFAAIENGYKLRRPDELPFDL
CFGGRRQFCKSTYADLDSNREEEEPTPAKNEEEELDFDTLLKQAQKGLKR
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctcctagctatagctgaacgaagccatgtgaggatctgtaaaatggcggcg
cagtggcgtggaaaagatgagcttataatcaccggcaacacggaatttctgaccgcaaac
acattcaatgaggctgtcctgggtaaaggggaagtcagtgatctggaaatggacactcac
tcctgcctggacccttccatcctggcaatgtttgaagactccgccgtagctgcagagact
gggagcagactggatgaggagagtgagtccacgttgttgacggctctaacagagatcctg
gacagtgttgacgatgagaccctgtctccctttgacaccctgcctgacactgggctcttc
tctgaccagaggctacgggacaactccccgttgaggcggctgctgagtttaacacggtct
ccacctgataaagaagcactctttcattccataaagaccccctcttcatcttcatcccct
tcttcatctgttggaaaggttgagacggtcattccagacagaccctggagggctaggcta
actcccagagcccagggctcttccacatccacacagaggagcgatggagaggaggagggc
ggcaaggtccacattcacagcccgcctcagggcttcaatctgaccaatcaggactcggga
gaactcttcctcgaccgatcagaagtgagagcgctgaactctgtagagaaggaccatggc
tactcctctacagtgtccctggtggacctggtgaaactcatgcacccctactgcctgagg
gtgtgcctggatgaggaggggaaggactgggtcggcacatccaggcaggaggcctcctcc
ctgggggaacggagcgcggaccagagtgtacccctggagggcgaggtgtggagatatgcg
aagcctggttcagaagagagcgacgaggaaattgatgtggacggatcagatgacgagtgt
ccctcggtaggagggatgaaggatgagaaagagggggatggagaacagggaagtaaaggt
gaagaagtgaagcaactaaaaagtctacttgtgaagtgggatgggcccaaagaaggccag
aagaccaagaacaaaaaaagagtgaccttcggacctgtcctggtgacatcctacgagcta
ccggcagcagacgaacctgacttaaacacgctcccggacttgtgcgaactcaccagccaa
atccccatttttgacttcaacaccaaaacaacgaccatttcccttaccacatcctctcca
gagtcttcagcagcgtcttcaaaggacaaccatcatcaggttgtaactgacttgtctgaa
aggaccggagatacgtcgtcgtcgcagcctccaccacagcgaggcgagtccaagcccaga
ccggccctcagtctccagcagtaccgcctgctgcgccagcaaagactacccctggtgggg
aaacctgagaattacaccaccaaatggccctctctacctgaaacccccacggagttgcct
cctataccctatttacaaggacctaaatatagcatgtggggaccaacgaccacacatcct
acacatcattacataggaagtaaaacagggggtgatgtcagtggattcaagcctatatct
aagacaaggacgaagatggtctctcctgcttgtcccagtaaacctggtaaagccattggc
atcaatggatcaaagcctgttagaagtgggactaagactcctcctaccagctcagcttta
aagcccaaacgcaactcaatggaagctacatctgcgaatgatgttggtgtattaaagcct
atttggactgagaccatctctcctgctagtcccttaccaagtcccaacctaaactccaac
tcagtggcgggtctgggccagaacaggactagcccagaaaagagtgctgttgcggtcagt
agcgaccccccaaaccctgtcctggtcccactaccaggaacccgtccatctttggatgga
tttgataggagccgtgggaccaaccaggagaagcaggaacaatctctacctcgatccacc
acccaggagtctccggcgcccaagcccaaaatggtgttctgcaaccgggatccaagcctg
aagagcaccagtctcctccttgagatccaacggaggttctccaccaaacaaccatcgcgg
aaagcacttcacacccaaaacactgcagagaccacaaaacaaggggatcagcctcgctct
ctcagcccaaggaaaggaatcgagaccgtaccagaagggtccaagttttccccaagtgca
ccagtaatggcaagtccatcctccagcccctcagtccatccacccacccatgctgttact
ccttacccagagatggagagggcaaagcgggtagcccttggtaacctcccccatgtccga
ctgtccacctctccagagagtaacacctgcatacagacccccacctgcggcacaggaatc
caagccacagatctgaccagccttctggagcggtttgaggaaacacaagccaaagaggag
actgagagggaatctgaaagcagtccagataggagccctgttagagatgaagagccgagc
aacaacactgaagggatgctgacactgctgggtgcctatctcctcagcacccaagataaa
ctctgtcttccagcacccactggctttccagaacttgtcaacacactcgaacccctcaga
actccggagcccctcagaactccggagcccctcagaactccggagcccctcagaactccg
gagcccctcagaactccgggacccctcagaactccggagcccctcagaactccggagccc
ctcagaactccggagcccctcagaactccgggacccctcagaactccggagcccctcaga
actccggagcccctcagaactctggaacgttgcgatactcaggaacctctcagcacccag
aatgttctcagcactcaggaacaggcccctgcacagccgcgctggaaaccacttacccct
gtcgcacctcagaggaagcaaccggcgacccccaaacctctccctcacaaggccatccaa
atcatcaacccccgtcctctaccacccaaaaaggcccaccccctccccccaaagccccct
gtcaccccccctgagttccagacaccagtatctgtctcctcagaccacgactactgtcta
tctcaggatcaaccagggagtaatactactatgttatgcagcaaaagacaaaccatactc
cccgaccaccaaccaattcccaacccctcctcagtgcccggcacacagaactctgggaaa
tatttgcggcagcagcagccagtggactccaggactgttccagagacacaacttccctca
gactctgctccgccatctacagagagctccccctctaggacggacgccattactgcaggg
gagacacaggcagagagaaccagcccctgcatcccctcccctccttcacccagtccccct
gccagaggtaggaggtcgtcccggcgctatcggacaaggtcttcatgctcggactctagc
tctaggtccccttcttcatcgtcatcttcctcatcctcctcctctcgatccaggtctcgc
tctccaccccgaaagaggttctgtcccaggcgttctgaaagcagctcctcctcctcgtcc
tcttgctccagctccgtctcccgttccccggttccctgccggtaccggctcccctaccca
cagtcctggaaccgctctcggtccacatcaaagtcctggactcagtctggttccagatct
cggtccagatcccccaccacactggcctacagcagaacccagaggtggagggactgctac
agctccaacaacgtcagggactccaggaaacgaaagagacaacaagatatgaggaatcaa
aaactcaaagccatagacgagcgcagggtggtgtacgtgggccgcatccagaggaccatg
atgcacgcggagctgagagaacgcttctctctgtttggagaggtggaggaatgcaccctg
cactttagagacaggggcgaccattacggctttgtgacgttctacaacatgaaagatgcg
ttcgcagccatcgagaacggttacaagctgaggagacctgacgagctgccctttgacctc
tgcttcgggggcaggcgtcagttctgcaaatctacgtacgccgacctagattctaatcgg
gaagaggaggaacccactccagcgaaaaatgaagaggaggagctggactttgacactcta
ttgaagcaggcacagaaaggcttgaagcggtag
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