Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370241
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Entry
139370241 CDS
T10872
Name
(RefSeq) far upstream element-binding protein 2-like
KO
K13210
far upstream element-binding protein
Organism
ocla
Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139370241
03041 Spliceosome [BR:
ocla03041
]
139370241
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139370241
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139370241
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_PNO1_2nd
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
139370241
NCBI-ProteinID:
XP_070965699
LinkDB
All DBs
Position
17:10579779..10595633
Genome browser
AA seq
669 aa
AA seq
DB search
MSDYGSPGAGAGAGGKKDAFADAVQRARQIAAKIGGDAGPPSNNGGAGGGEGFPFQTLKR
SLEDGDQPDAKKMSSQGDRDSATALSIGAQLAALSQQSVRPSTMTEEYRVPDGMVGLIIG
RGGEQINKIQQDSGCKVQIAPDSGGMPERSVSLTGNPDAIAKAKMFLDEIVSRGRGAPSS
SFHESTNGQSGSMQEMMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPNMDKP
LRIIGDPYKVQQAKELVNEILRERDHAGFGDRNNFGNQMGGGGGGGGGGMDVPVPRHSVG
VVIGRSGEMIKKIQADAGVRIQFKPDDGAGPDKIAHIMGPPDRCEHAASIINELLQSIRV
REDGGQGGPPGPPGTGGMPQGGHGRGRGQGNWGGPPGGEVTFSIPAHKCGLVIGRGGENV
KAINQQTGAFVEISRQPPPNGDPNFKLFIIRGSPQQIDHAKQLIEDKIEAPLCPLGGGPG
GPGPAGPMGPYNPNPYNPGPGGPGGPPHGGPPGGHGYGAPQGWGNTFQQWQAPGGPHDPN
KAAADPNAAWAAYYAQYYQQQPGGAMPGQAPNAPAAAPVQADPSQAAQTPGGQPDYTKAW
EEYYKKMGMAQPGGGAAAAPAAAVAGGGAGGQQDYSAAWAEYYRQQAAFYGPGGAPGQAA
TPQQGQQAQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacggctcacccggggccggagcgggcgctggaggcaaaaaagatgctttc
gcggacgccgtgcagcgagccagacagattgcagctaagatcggaggagatgccggacct
ccaagtaacaatggaggagcaggaggaggagagggcttcccgttccaaacactgaaacgc
tctctggaggatggagaccaaccagatgccaagaagatgtcttcccagggggacagagac
tcagccactgctttgtctatcggagctcagctcgctgccctgtctcagcaaagtgtcaga
ccctccactatgacagaggagtacagagtgccagacggcatggtcggactcatcattggt
cgagggggcgagcagatcaacaagatccagcaggactcgggctgcaaggtccagatcgct
ccagacagtggtggcatgccagagaggagcgtctccctcacaggaaaccctgacgccatc
gcgaaagccaagatgtttctggatgagattgtatctcgggggcgcggtgctccttcctct
tctttccacgagtcgaccaatgggcagagtggctccatgcaggagatgatgatcccagct
ggcaaggccggcctaataatcggcaagggaggagagaccatcaaacaactacaggagcgt
gctggagtgaagatgatcctcatccaagatggttcccagccacccaacatggacaaaccc
ctgcgcatcatcggagacccctacaaagtacagcaagcgaaggagctggtgaatgagatt
ctgagagagagggatcacgctggctttggagaccgaaacaattttggcaaccaaatgggg
ggaggcggtggtggaggaggaggaggcatggatgtgcccgtgccccgccactctgtggga
gttgtgattggtcgaagtggagagatgatcaagaagatccaggcagacgctggagttagg
atacagttcaaaccagatgacggtgcaggtcctgataagatagcccacatcatgggccct
ccagaccgctgtgagcacgctgcctccatcatcaacgagctgctgcagagcatcagagtc
agggaggacggaggacaggggggtcctccaggtccacctggcacgggggggatgcctcag
ggtggccatggcagggggcgaggccagggcaactggggcggtcctccgggaggcgaggtc
accttctctatccccgcccacaaatgcggcctggtgattggtcggggtggcgagaacgtc
aaggccatcaaccagcagacgggggctttcgtggagatctcgcgtcagccgccgcccaac
ggggaccccaacttcaaactgttcatcatcagggggtcccctcaacagatagatcacgcc
aagcagctcatagaggacaagatcgaggctcctctgtgtcctctagggggaggtcctggg
ggacctggtccagctggtccaatgggcccctacaaccccaacccttacaacccagggcct
ggtggccccggaggacccccgcatggtggccccccaggtgggcatggttatggggcccct
cagggctggggaaacaccttccagcagtggcaggcccctggagggccacacgaccccaac
aaggcagcagcagaccccaatgcagcgtgggcagcctactatgcgcagtactaccagcag
cagccagggggcgccatgccgggccaggcccccaacgccccagcagccgccccagtccag
gcagacccctcccaggcagcccagacccctggaggccagccagactacaccaaggcctgg
gaggagtattacaagaagatgggcatggcccagcccggtggaggtgctgcagcagcgccg
gctgcagccgtggccgggggaggagccggcggacagcaggactacagtgcagcctgggct
gagtactacaggcagcaggcggccttctacggccctggaggggctccgggacaggctgcc
accccacagcaaggacaacaggcccagtga
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