Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370269
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Entry
139370269 CDS
T10872
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139370269
Enzymes [BR:
ocla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
139370269
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
139370269
Prokaryotic type
139370269
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
139370269
NCBI-ProteinID:
XP_070965747
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Position
2:56118354..56130669
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AA seq
723 aa
AA seq
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MGGFQGVTISGVKYTWVGNLAYFIVRSLLNPCTSRSIRNSLWVALRYHTPHLRTPDIRAP
GVCQIHSFFFKVPISNLLIPMADAEPMLVPAPGGEKRACLALEEEEEVDHSTKRPRVQKE
EKNGGPSHKLSQDEGEEPEGEETEPLDEDGEGEGLGSGEAFAEMMKHGLTELDVGILKFV
SEHQGFSGILKERYSDFVVHEINKEGKTVRLDDLSVPEEAEEAPVEQPESQVFTEEQNQQ
LEQLQLFKNKEGNVSIEVADDTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAG
QKALAAPRKHSWPKSRGAFCHFVLYKENRDTMEAINVLSKFLRMRPNVFSYMGTKDKRAI
TVQEIAVLKITAERLSHLNKCLNNFKLGNFCYKKHPLKLGELQGNHFTVVIRNITGTEEQ
VQQAMSSLRETGFINYYGMQRFGTTAVPTHQVGKAILQDNWKEVIDLILKPRPGAEKGYL
VKCREEWAQSQDPEAALKKLPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHS
YQSFMWNTMVSRRIEAFGLKAVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIY
PTHHVGKGYREMLSADNLDIDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYEDPRVSL
VHTDVEKLEDQPPPVFNKEGKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTT
WLN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggtttcaaggagtgactatttccggagtcaaatacacgtgggtaggaaacctg
gcgtactttattgtgcgctctctactaaacccctgtacgagcaggtccatcaggaattct
ctttgggttgctttgaggtaccatacaccccatctacgaactcctgacatccgagcacca
ggtgtctgccagatacacagctttttctttaaggtccctatcagcaatctcttgatccct
atggccgatgcagagcccatgctggtccctgcccctgggggggagaagagagcatgcctt
gctttggaggaggaggaggaggttgaccacagcaccaagagacccagagtccagaaggag
gagaagaacggagggccctctcacaagctgtcccaggatgagggagaagagccagagggg
gaagagacggagccattggacgaggatggagaaggggaagggttggggtcaggagaggcc
tttgcagagatgatgaagcatggcctcacagagttggatgtggggattctgaagtttgtc
agtgaacaccaggggttctcaggcattctcaaggagaggtactctgactttgtggtgcac
gagatcaacaaagaaggcaagactgtgcggttggatgatctctctgttcctgaggaggct
gaggaggccccagtagagcagccagagtcccaggttttcacagaggagcagaatcagcag
ctggagcagctacaactcttcaagaacaaagagggtaatgtctctatagaggtagctgat
gacacaaaagagaagcggaccctggtccacaaggctgtgaagaccctgtaccctggactg
gagaccaagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagctgga
cagaaagccctcgcagcccccaggaaacactcctggcctaagagccgcggggccttctgc
cacttcgtcctctacaaggagaacagagacaccatggaggccatcaacgtgctctccaag
ttcctcaggatgaggcccaatgtcttctcctacatggggaccaaggacaagagagccatc
actgtgcaggagattgcagttctcaagatcacagcagaaagactgtctcacctcaacaag
tgcctcaataactttaaactgggaaacttctgctacaagaaacaccctctgaagctggga
gaactacagggcaatcacttcactgtggtcatcaggaacatcacagggacagaggagcag
gtccagcaggccatgtcctcccttagagagacgggcttcatcaactactacggcatgcag
cgctttggcaccaccgccgtgcccacacaccaagttggcaaggccatcttgcaagacaac
tggaaggaagtgatagatctgatcctgaagcctcgccctggagcggagaaaggttatctg
gtgaagtgccgtgaggagtgggcccagtcccaggacccagaagcagctctaaagaagctg
cctgttaaacgctgtgtggagggacagctgctccgaggtctctccatgtatggcaagaag
aacatcatcactgccttcgccatgatccctcgtaacaaccggctgatgtacatccacagc
taccagagctttatgtggaacaccatggtcagcagacgcattgaggccttcggactgaag
gctgtggagggagacctcgtgctcaggggaggcactgcattcgtgctgtccgcagcagag
gccgagacccactctatccaagacgtggtgatgcccctaccagggtttgacgtcatctac
cccactcaccacgtgggtaagggctacagggagatgctgagtgcagataacctggacatt
gacaacatgcgacacagggtgagggactactctctggccggggcctaccgacgcatcctc
atcaaacccagtgacgtcagctgggaggtgattaactatgaggaccctcgtgtctccctg
gtccacactgatgtggagaaactagaggaccaacctcccccagtcttcaacaaagagggg
aagtacagggctctgaggatggagttctccctgcctccctctacctacgccaccatggcc
atcagagaggtgctcaagatggacaccagcatcaagaaccagactcagctcaacaccacc
tggctcaactaa
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