Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370286
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Entry
139370286 CDS
T10872
Name
(RefSeq) girdin-like
KO
K25392
girdin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139370286
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139370286
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
DUF4472
ATG16
BRE1B
INO80F
Motif
Other DBs
NCBI-GeneID:
139370286
NCBI-ProteinID:
XP_070965778
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All DBs
Position
17:12846906..12890131
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AA seq
1858 aa
AA seq
DB search
MESEVFLPHLEQFMLSPLVIWVKTFGQNYGNMPLDYSELLDGVVLNKIMIQINPKATLQS
VNKVNNDPSQRILNLTVLIRQIKTYYLETLRQLIMMPLPNVLVLGRTPHCEQSLEEMKKL
LLLLLGCAVQCEKKEEYVERIQTLDFDTKAAIAAHIQEVTHSQDSVLDLHWLEASELCAE
DLETLFRRLVDQRDTQLETILELMQERESTPSPSPPSAQSPSDCPSMQQQAASHQHLSVE
LADSKAKVRRLRQELEEKSEQVQDCRQELENMEAEFNRIQQENSVLLAEARSARTYRDEL
DALRERAIRADKLESEVGRYREKLHNMEFYKAKVEELKEDNSVLLETKAVLQQQLEGWRA
RSDKLHQLEKHSLLLNARVHVMEQEKEVDRRRMEELQEENLALELAQRRSMEESQHLGWE
LEQLSRSPDNSQGQKSLGEEVVEGTRSRLLRLERENQSLLRTIEELRAADLSLGPQHNHN
HEHTWRDGQRPTNTAEVVREYLGSLDNTSWEQSELVIKEDCDIDIDTSHHRDPKYNGVSV
DLEGEIDRLERESETLKEKMNLQKQEKGQLEDGESCDLSDPIADLEAVAKDNTRNLLQPG
ASVSLTRDTSPCSKNKSPRRENNSTGLQARASSSSTKHTERLEAKCRALDTENQRLQAAL
DNTGRKLQRLEAEVHELEAENQILQAGLEELRISSRRMEQLEQEKQTLEQEASGLERDKR
RLEKDNRRLRQQAEIQDSTLDGSNLRVASLERENRGMGKEVERLKEVEERVKGLERDNRE
LAKQGAINQRALVTLREELVSDKLKTQQRENELERLAHELEMRVLNQDTSPQSDEETPDN
SRFKMLESELESSLKRSLQIKEDKMAAVEARLQESSTLNQQLRQELKTVRLNYEALLQRE
EEEHAARSPTPQRESDRAVSEWQWESQEATRELLRVKDRLIEVERNNATLQAERQALQAQ
LRQLETQSDGLQAQILALQRQTASLQENNTALQTHNANLQVEKSTLNSQSASLLAQNAQL
QCQQSSTEGDKELAMREREELRGVHDQLLRDHERLAALHERQAMDYEALMGKHGCLKNAH
RTLELEHRTLEDRYKTLLRQKAKLEGLEKALREEQDKMSVEKEQHRTTASECRQLRDEKD
WLNQTYRQLLKDQEELQADHKNMKTLLNSTKLEQTKLESDFNKLREQYQQLDITNTKLTN
QCELLSQLKGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQHIDKLNELRR
QKEKLEEKIMDQYKFYDPSPPRRRGNWIALKMRKLMKPRSRERCGTASSSDHHRSLTPTR
SGSFEALPPTSPSASCCQDNGSFVGSDGSGGSTTSPRRSSTLNDLDKLNDLVYPSTLSED
PEQLEGSEVKNDRSRKESMTSSMSDSILSIINHQHQPTTTPLFYPTTTAAAAATDGNERC
LTDKDCTDSAVAADFDDGDELQNHGLNGVQSRAQSQSSGEFSLSLDNEPWSNGSSPVQPP
PSSRRSSSSCLPPSDTSTPRHTRQNPSPTTHTQQRSTSLTHTSSNKHRERVGVKNSSPIA
IANTQGSVPCRGREVGSTQDPWPRRSVLRRCASGSRAPQRPSEGNVPKTAQGKVAVLSRS
GLGLNKAPESTTTRASAMSPITVLYVQGKSSSVSGCLNCFSTPLGKEARLRGPWSPASLP
RASSVISTAEGSSRRSSVNSDSRVMAKVDPLPIMESDGSPNQVNQNQNKQNNPEEQDTDN
HPPPPSKPPRDPAIATDRPKSTCQESLFGGTPFNLDSVFSDTIFSESVVTTTTSNSSNNN
DKNQTFLCLDPNLERNISCPLLRQESTNGTALGHMDNVQSQNGGQEDCESNTVEITQC
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggtttttcttccccatctggagcaatttatgctcagcccgcttgtcatt
tgggtgaagacatttgggcaaaactatgggaacatgccattggattattccgagttactg
gatggggtcgttttgaacaagatcatgattcaaataaatcccaaagcgactcttcagagc
gtcaacaaagtgaacaacgaccccagtcagaggattctgaacctgaccgttctcattcgt
caaatcaaaacctattacctagagactctgaggcagctgatcatgatgcctttacccaac
gtgttggtgcttggcaggactcctcactgtgagcaaagtctggaggaaatgaagaaatta
cttcttctcttattgggctgtgctgtccagtgtgagaagaaggaggagtacgtcgaacga
atccagaccctcgactttgacacgaaagcagcaatagctgctcatatccaagaggttacc
cacagtcaggacagtgtactggacctccattggctggaggccagcgagctctgtgctgag
gacctggagaccctgttcagacgcctggtggaccagagagacacacagctggagactatt
ttagagctaatgcaggagagagagtccaccccgtcaccctctccgcccagcgcccagtcc
cccagtgactgtcccagcatgcaacagcaggcggcctcccaccagcacttgtctgtggag
ctggccgactccaaggccaaggtcagacggctgcgccaggagctagaggagaagagtgag
caggtacaggactgcagacaggagctggagaacatggaggctgagttcaacaggattcaa
caggagaactctgtgttgctagcggaggcccggtcagcccgtacgtaccgtgacgagctg
gatgccctgagagagagggccatcagggctgacaagctggagagcgaggtgggacgatac
cgcgagaagctacacaacatggagttctacaaggccaaagtggaggagctgaaggaggat
aactctgtgttgctggagaccaaggctgtactgcagcagcagctggaggggtggagggcc
cgctctgataaactacaccagctagagaaacacagtctgctgctcaacgccagggtccac
gtcatggaacaggagaaggaggtggacaggaggcgcatggaggagctgcaggaggagaac
ctggccctggagctggcccagaggaggagcatggaggagtcacagcacctgggatgggag
ctggagcagctctccaggagccccgacaactcacagggtcagaagtctctgggtgaggag
gtggttgaggggaccaggagtcgtctgctgaggctggagagagagaaccaaagcctgctc
aggaccatagaggaactgagagctgctgacctcagcctgggaccgcagcacaaccataac
catgagcacacgtggcgggacggccagcgacccacaaacacggctgaggtggttagagag
taccttggcagtttagacaacacctcctgggagcagtctgaattggtcatcaaagaggat
tgtgacattgacatagacacatcacatcacagggacccaaagtacaacggagtgtcggtt
gacctagagggagagattgaccgactggagagagagagcgagaccctcaaggagaagatg
aaccttcagaagcaagagaaaggccaacttgaagacggagagtcttgcgacctgagtgac
cccatagctgacctggaagctgtagctaaagacaacacccgcaatctccttcaaccaggc
gcttcagtgtctctgacgcgtgatacctcaccctgctctaagaacaagagtccacgtcgg
gagaacaatagcacggggctgcaggcgagggcttcctcttcatccacgaagcacacagag
cgtctggaagcgaagtgtagagccctggacacagagaaccagcggcttcaggctgccctg
gacaacacaggccggaagctccagcggctggaggccgaggtccacgagctggaggctgag
aaccagatcctgcaggctgggctggaggagctgaggatctcctcgcggcgcatggagcag
ctggagcaggagaagcagaccctggagcaggaggcttcaggcctggagagagacaagagg
aggctggagaaggacaaccgcaggctgaggcaacaggcagagatccaggactctaccctg
gacgggagcaacctgagggtggctagtctggagagagagaacagggggatggggaaggag
gtggagaggctgaaggaggtggaggagagggtcaaggggctggagagggataacagagag
ctggccaagcagggagcgatcaaccagagggccctggtcaccctgagagaggagttggtg
agtgacaagctgaagacccagcagagggagaatgagctggagaggctggcccacgagctg
gagatgagagtcctcaaccaggacacatcaccacagagtgacgaggaaactccagacaac
agtaggttcaagatgttggagtctgagctggagtcgtctctgaagaggtccctgcagatc
aaagaagacaagatggctgccgttgaggctcgtctgcaggagtcctccaccctcaaccag
cagctacgtcaagagctcaagactgtgcgtctgaactacgaagccttgctgcagagggag
gaggaggagcatgcggcccgtagccccacccctcagagggagagtgacagggcggtaagc
gaatggcagtgggagagccaggaggccaccagggagctgctgagggtcaaggaccgcctc
atcgaggtggagaggaacaatgccacactgcaggcagagcgtcaggcactgcaggcccag
ctcagacagctggagacccagtcagacggcctgcaggctcagatcctggccctgcagaga
cagaccgcttccctgcaggagaacaacacggctctccagacacacaacgctaacctgcag
gtggagaagtccactctgaactcccagagtgcatcactcctggcccagaacgctcagctc
caatgccaacaatccagcaccgagggggataaggagttggccatgcgtgagcgcgaggag
ctgcgcggcgtgcacgaccagctcctgagggaccacgagaggctggcggcgctgcacgag
agacaagccatggactacgaggccctgatggggaaacacggttgtctgaagaacgcccac
cgcactctggagctggagcatagaacgctggaggacaggtacaaaaccctgctgcggcag
aaggccaaactagagggtctggagaaggctctgagagaggagcaggacaagatgtctgtg
gagaaggagcagcacaggaccaccgcctcagagtgtcgacagctccgggatgagaaggac
tggctgaaccagacgtaccgtcagcttttgaaggatcaggaggagctccaggcggaccat
aagaacatgaagaccctgctgaacagcaccaagctggagcagaccaagctcgagtctgac
ttcaacaagctcagagagcagtaccaacagctagacatcaccaacaccaagctcaccaac
cagtgtgagctgctgagtcagttgaaggggaacctggaggaggagaaccggcacctgctg
gaccagatccagaccctgatgctgcagaaccgcaccctgctagaacagaccatggagagc
aaggacctgttccacgtagaacagagacagcacatagacaagctgaatgagctgaggaga
cagaaagagaagttggaggagaagatcatggaccagtacaagttctatgacccctcaccc
ccacggaggcgtgggaactggatcgccctgaagatgaggaagctgatgaagccgaggagc
cgcgagcgttgtggcaccgcctcctcttctgaccaccatcgctccctcacccccacacgc
tctggctccttcgaggccctcccgcccacctccccctctgcttcctgttgccaggacaat
ggctccttcgtgggttcagacggctcgggtgggtccaccacttccccccggaggagcagc
accctgaatgacctggacaaactgaatgacttggtgtacccctcaaccctgtctgaggac
cctgagcagctagaggggtcagaggtcaagaatgacagatccaggaaggagtctatgacc
tcatccatgagcgactccatcttgtccatcatcaaccatcaacaccagcccaccaccact
cctttgttttatcccaccaccacggctgctgccgctgccactgatggcaatgagcgatgt
ttgacagacaaggattgtactgacagtgctgtggcggctgactttgacgacggggatgaa
ctacaaaaccacggtctgaatggcgtgcagagccgtgcccagagccagagcagtggagag
ttcagcctcagcctagacaacgaaccctggtccaacggcagtagcccggtccagccgcct
ccgtcatcccgccgctcctcttcctcctgccttccgcctagcgatacctccaccccccga
cacacacggcagaacccctcgccgaccacacacacacagcagcgatccacttccttaaca
cacaccagcagcaacaaacacagagagagggtaggagtaaagaactcctcacctattgcc
atagcaaacacccagggttcagttccctgtagggggagggaggtgggtagcacccaggat
ccctggcccagaaggagtgtcctcaggaggtgcgccagcggcagcagagccccccagcgc
ccttccgaagggaatgtccccaaaacagctcaggggaaggttgccgtactatctcgatct
ggattaggtctgaacaaagctccggagtccaccaccacccgagcctcagccatgtccccg
atcacagtgctctacgtccagggtaaatcttcctcagtgtctgggtgtctcaactgtttc
tccaccccgttggggaaggaggcgcgtctgagagggccatggtctcctgcctctctaccc
cgggccagtagcgtcatctcaacagccgagggttcttcgcgacgatccagtgtcaacagt
gactctagggtgatggcgaaagtagatcccttacctatcatggaatctgatgggagcccg
aatcaggttaatcagaatcagaacaagcagaacaatccagaagaacaagacactgataat
cacccaccaccaccaagcaaaccccccagagacccagcgatagccaccgatcgacccaaa
tccacctgccaggaatccctcttcggtggcaccccgttcaacctagactctgtcttctca
gacactatctttagcgagtcggtagtcaccaccactactagtaacagcagcaataataac
gataagaaccagactttcctctgtctggacccaaatctggagcgtaacatcagttgcccg
ctcctgaggcaggagtccactaacggcacggcactgggacacatggacaatgtacagagc
caaaatggaggacaagaagactgtgagagtaatactgtggaaatcactcagtgttga
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integrated database retrieval system
