Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370328
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Entry
139370328 CDS
T10872
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139370328
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139370328
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
139370328
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
139370328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
139370328
NCBI-ProteinID:
XP_070965843
LinkDB
All DBs
Position
2:56612228..56642126
Genome browser
AA seq
1924 aa
AA seq
DB search
MYSSPDVCLKSGSHNSSSNSNSITELLGSLCDSSLTGVSWKRRALGGVSREGVRRTLRKR
AYGALLSKLFQEGSPKGLLSVPSATSTTPPRNKLLMISFDLRVAGCQDEAERLEEQLGRL
SEGPASGLKELDSVLELLVQLTGSAPPPPASFSRDYMRRERPVLRRPPLGGYQSEELQRL
EARAWALMCGEEWGSLKGLCGTLGLMDAPPGTGLLALRRRSDVEERFEKETRMSLFGALQ
HSRTSDLDIRLNLPPVPSNADVTGLAIRVPPCLDQLEDEGFQSASNLTPDSQSEPSPSPE
LDVWDALRTFEPGRRRCWESVGCPPGKREFPYLTEGGREAFDQLYRLWEGEMRVVCSASP
SPLLPLPLDCQTQLVSDLLNVLIGVASTTFPLNQVCVNFDVRPGVCVSGASPESVSRLLG
ELAQYGTHYLRLSRFVLQSAQKRGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTIGFL
FRKVGRQLRYLSELCCVDGASGVGQATFPVGVTLLSYLYNEAQSNCSNENYPVLLSLLKS
SCEPYTRFVSDWVYSGVFRDVYGEFMIQVNEDYLSFRDKHFWAQGYTLISRDVEDCVPVF
LRHIANDVYVCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEEIERDCAVYRGRM
ERIAKHSATSREEQALRTEQARQELINQVRQSAAKTLESIRGRQVSQRLAEEAKKRERFE
ELRQHLEQEQEWHSLARRKEQEDEFSFARELRDREKRLQALEEQLEIRARKELIAQYSHL
SEEAAKREWRAMWRVQRMRLDDFRAQFLQQDQQETEAILEKYPVGGQRPPLEILQPAPAQ
TTQPLTQESLSPEPCEQQSEEPTQAPLPHQSTPPALPTTKLDLTLVTEHIDANDFLPKPA
DSLQVDQALQEIGSDLPEALAPHKPVDYDFSAPYSPLEGVTAPALARPCWGPVVQPDMTH
PHIPTGPPESTLGMGCVVSGTLALPSPLPGSTYGHSSDSTMGVGCVVSGAEVLPRPSPHG
QASQSSIPLGQYFSDVPLALHAANVHGHPSQTTVQLVDGSESKQMDSRQENTEDPSSPGG
IVKEAEGTVEASCLVEMKPAEMEKLDRLGAEEQMAGSLREASASYTPEQGHDSGYHPGQA
SPSLSGPSSVYELPTSNIQGHASDAHIKVGEHVSDVEAPLPSQNVHGHSSDANIKVGEFV
SEVTAPLPTANIHGHASDAHIKVGDHVSEVVASLFTQNIHGHASDSHIKVGEHMSEEVAS
IHTQNIHGHSSDTHFKAGEFVLDAEPSRPRWSKHGHASDCTLQVGCMMSGTEPVLSPLPG
STYGHSSESTLGIGCVVSGVELLHAPLPGSDFGHASDSTLGGGCVVSGTVTLPSPIPGSD
YGHSSDSAMGGGCVISGIEPVRAPLPGSNFGQSSDSTLGTGCVVSGVSPLPSPIPGSIYG
HSSDSALGGGCKVSGVNPLPSPIPGSIYGHSSDSALGGGCKVKETGNEYDARTLEQQEQQ
RLAEGISSWAAGLALSPGESSEREYLRSLAAQYQVEQYEDCYGLMTLAPECHPLHQVTRG
PWGLPVDPSLRRATDTTVVQLSGMVSLPVLMKHSVTTPLITHVSLVNKAVVDYYFVELGV
ERHFEALRHFLLMEDGEFAQSLSDLIFEKMGSGQTPGELLTPLVLNSILSKALQYSLHGD
SSLAPNFTFALRFLPETFHPHAPDALNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQ
LKHMVWSLRDVWFHLKRTALVKGAGRSVQFRQLQLYRHEMQHFVKVIQGYIANQILQVSW
LEFTTKLASASDLDAIHRTHADYLNRAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQLIA
QPWDSQQGEAVHPSFIAMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNY
YKDS
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgtactccagtccagatgtctgccttaaatctggcagtcacaacagtagcagtaacagc
aacagcatcactgaactcctgggctccctgtgtgacagcagcctcactggggtgtcatgg
aaacgtcgtgctctaggaggggtgtctcgagagggggtccgccgcactctcagaaagcgt
gcctacggggccctgctgtccaaactgttccaggagggctccccgaaagggttattgtca
gtacctagtgccacgtccaccaccccgcccagaaacaagctacttatgatatcctttgac
ctgcgagtggcggggtgccaggacgaggccgagaggctggaggagcagctggggaggcta
agtgaggggcccgcctcgggtctgaaggagctggactctgtgctggagctcttggtgcag
ctgactggctctgcacccccacccccagcctcattcagcagggactacatgcgcagggag
aggcccgtgttgaggaggcctccactggggggctaccagagcgaggagctgcagaggttg
gaggcccgagcctgggccctgatgtgtggggaggagtggggatccctgaagggtctgtgt
gggactctgggtctgatggatgctcctccgggcacaggcctgctggcactgaggaggagg
tccgatgtagaggagaggtttgagaaggagaccaggatgtctctgtttggagccctgcaa
cactcccgtacctcagacctggacatcaggctcaatctgcctcctgttcccagcaatgct
gatgtcactgggctagccatacgggtgccaccttgtttggaccagttagaagatgagggc
ttccagtcagcctccaacttaaccccagactcccagtcagagcccagtcccagcccagaa
cttgatgtctgggacgccctgaggacttttgagcctgggagacgccgctgctgggagtct
gttggctgcccaccagggaagagggaattcccctacctgacggagggaggcagggaggct
tttgatcagctctacaggctgtgggagggggagatgagggtggtatgctctgcctcccct
tcgcccctcctgcccctgcctctggactgtcagacccagctggtcagtgacctacttaat
gtattgatcggggtggcgtctactaccttccccctcaaccaggtgtgtgtaaattttgac
gttcgacccggagtgtgtgtgtcgggagcgtcaccggagagtgtgtctcgtttgcttggc
gagctggctcagtatggcacccattacctgaggctcagtcgcttcgttctgcagagtgcc
caaaagagaggtctggtcttccaggcgtttacaggtggactgcgtaagtacctgcattac
taccgggcctgtgtcctcagcacccctcccacccttagcctgctcaccatcggcttcctg
ttccgcaaggtgggccggcagctcaggtatttgtcagagttgtgctgtgtggatggggca
tctggtgtgggccaggctaccttccctgtgggtgtgacgctgctctcctacctgtacaac
gaggcccagagcaactgcagcaatgagaactaccccgtgctgctgtccctactgaagagc
agctgtgagccttacacacggtttgtgtcagactgggtgtacagtggagtgttccgggac
gtgtacggagagttcatgatccaggtcaacgaagactacctcagcttcagagacaagcac
ttctgggcgcagggctacacactgatctcccgtgatgtggaggactgcgtgcctgtcttc
ctccgacacatagccaacgacgtgtacgtctgcgggaagaccatcaacctgctcaagatc
tgctgtccccagcattacatctgctggtcggagctacccgtgcctcgcatcgctgtcacg
ttctccctgcaggaggtagaggagatagagagggactgtgccgtgtaccgaggacgcatg
gagaggatcgccaagcacagcgccaccagcagggaggaacaggccctgcgcacagagcag
gcacgccaggaactgatcaatcaggtcaggcagtcggccgccaagaccctggagagcatc
cgcgggcgccaggtgtcgcagcgtctggctgaagaggcaaagaagagggaacgctttgaa
gagctgagacagcacttggagcaggaacaagagtggcacagtttagccaggaggaaggag
caggaggatgaattcagctttgccagggagctgagagaccgagagaagcgactacaggcc
ctggaggagcagctggagatccgagccaggaaggaactgattgcccagtacagccaccta
tcagaggaggcggccaagagggagtggcgggccatgtggagggttcagcgaatgagactg
gacgatttccgggcccagttcctacagcaagaccaacaggagactgaggctattctggag
aagtatcctgtcggagggcagagaccccctctggaaatactacagccagctccagctcag
accactcaaccattaacacaggagtccctatccccggagccctgtgagcagcagtctgag
gagccaacccaggccccccttccccaccaatccactcccccagcactccccaccacaaaa
ctcgacctcaccctcgtcacagagcacatcgacgccaatgacttcctgcccaagccggcc
gacagcctgcaagtggaccaggccctacaggaaattgggtcggacctcccggaggctctt
gcgcctcataaacccgtagactatgactttagcgccccctacagtccccttgagggagtg
acggccccggccctggctagaccttgctggggtcctgtggtacagccagacatgactcac
cctcacatcccaaccggtccccctgagtccactctaggcatggggtgtgtggtgtccggg
actttagctctcccgtctccgctacccggaagtacctacggccattcttcagactccact
atgggtgtagggtgtgtggtgtcaggagctgaggtcctccccaggcccagtcctcacggc
caggcctcccaatctagcatccccctgggccagtacttctctgatgtgcccctggctctc
cacgccgccaatgtccacggacacccctcccagaccacagtgcagctggtggatggaagt
gagtcaaagcagatggacagcaggcaggagaatacggaagacccatcatctccagggggc
atcgtaaaggaggctgaagggactgtagaggcatcatgcctggtggagatgaagccagct
gagatggagaaactagatcgtctgggagcagaggaacagatggctggttctctcagggag
gcttctgcctcctacaccccagagcagggccatgacagtgggtatcacccaggacaggcc
tccccttccctctctggaccctccagtgtgtacgagcttcctacttccaacattcaaggc
catgcctcagatgctcatattaaagtcggagagcacgtttcagatgtggaagcccctctc
ccttctcaaaacgttcatggtcactcatctgatgctaacataaaggtaggagagtttgtt
tcggaggtgactgctcctcttccgaccgccaacattcacggtcacgcatctgacgctcat
attaaagttggagaccatgtttcagaagtggtcgcctcccttttcacccagaacattcac
ggtcatgcctcggactctcacatcaaggtcggggagcacatgtcagaagaggtcgcctcc
attcacacccaaaacatccacggtcattcatccgacactcacttcaaggcgggtgagttt
gtgttggacgcagagccctcccgaccacgctggagcaagcatggtcacgcttcagactgc
acacttcaagtaggctgtatgatgtctggcacagaaccagtactctcccctttacctggt
agcacctacggccattcctctgagtccacactaggtatagggtgtgttgtctctggggtt
gaactccttcatgctcctctacctggaagtgactttggacacgcctcagactcaaccctg
ggtggagggtgtgtggtgtcaggaacggtaacccttccttctccgatacccggaagtgac
tacggccattcgtcagattcagcgatgggcggagggtgcgtgatatctgggattgaacct
gttcgcgctcctcttcctggcagcaacttcggacagtcctcagactccacactgggcaca
gggtgtgtggtgtctggtgtaagccctctgccctcccccatccctggcagtatctacggc
cacagctcagactctgccctgggagggggctgtaaggtgtcaggtgtaaaccctctgccc
tcccccatccctggcagtatctacggccacagctcagactctgccctgggagggggctgt
aaggtgaaggagactggtaatgaatacgacgccaggaccctggagcaacaggagcagcag
cggctggccgagggcatctcgtcctgggcagcgggcttggctctgtccccaggcgagagc
tcagagagggagtacctccgctccctggctgctcagtaccaggtggagcagtacgaggac
tgctacggtctcatgacgttggccccagagtgtcaccccctgcatcaggtgacgcggggc
ccctggggcctcccggtggacccatcgctccgcagggccacagacaccacggtggtgcag
cttagtgggatggtctccctgcccgtcctcatgaagcactctgtcaccaccccactcatc
acacatgtatccttggtgaacaaggcggtggtggactactacttcgtagagcttggagtg
gagaggcattttgaggccctcaggcacttcttgctcatggaggacggggagttcgcccag
tctctcagtgacctgatctttgaaaagatgggcagtggtcagactcctggagagctgttg
actcctctggtcctgaactccatcctgagtaaggctcttcagtacagtcttcatggagac
agttctctggcccctaacttcaccttcgccctgcgtttcctcccggagaccttccatcct
cacgcccccgacgcactcaactgcctggagctacggtacaaggtggactggccgttgaac
atcataatcacagacagctgtatgaacaagtacaaccgtctgttctccttcctgctgcag
ctcaaacacatggtgtggagcctcagagacgtctggtttcacctcaagaggactgcgctg
gtgaaaggggcgggccgctcggtgcagttccgccagctgcagctgtacagacacgagatg
caacactttgtgaaggtgatccagggttacatcgctaaccagatcctgcaggtgtcctgg
ttagagttcaccaccaagctggccagtgcctcggacctggacgccatacaccgcacacat
gcagactacctcaacagagctatcttcaggggtctgctgacagagaaggcagctccagtc
atgaacatcatccacagtatcttcagcctgatcctgaagttccgggcccagctgatcgca
cagccctgggacagccagcagggggaggcagtgcaccccagcttcatcgccatgcagcag
tcatacaacactttcaaatactactcccacttcctcttcaaagtggtgaccaagctggtg
aaccgaggatatcagcctcacctggaggacttcctgctccgcatcaacttcaacaactac
tacaaagactcctga
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